RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 SLC25A19Q9HC21 320 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 ZNF275Q9NSD4 429 aaPredicted RBP10.88□□□□□ -0.67
CLCN3-210ENST00000515420 KIF17Q9P2E2 1029 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 AP4S1Q9Y587 144 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 IGHV1-69-2A0A0G2JMI3 117 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 ZSCAN5BA6NJL1 495 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 LYNX1G3V0Z9 82 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 PRODHO43272 600 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 CIB2O75838 187 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 GYPBP06028 91 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 ACSM4P0C7M7 580 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 LYNX1P0DP58 116 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 PRKACGP22612 351 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 COL8A2P25067 703 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 FASP25445 335 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 TPTEP56180 551 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 CDK5R2Q13319 367 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 GINS1Q14691 196 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 LINC01590Q5TEZ4 76 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 CCDC121Q6ZUS5 278 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 RHOUQ7L0Q8 258 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 IQCF1Q8N6M8 205 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 OR10S1Q8NGN2 331 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 ZNRF4Q8WWF5 429 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 GTF3AQ92664 365 aaKnown RBP10.87□□□□□ -0.67
CLCN3-210ENST00000515420 SPTSSAQ969W0 71 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 CMBLQ96DG6 245 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 C1orf159Q96HA4 380 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 EGLN1Q9GZT9 426 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 POFUT1Q9H488 388 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 WDR76Q9H967 626 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 YAE1D1Q9NRH1 226 aa10.87□□□□□ -0.67
CLCN3-210ENST00000515420 PAPOLBQ9NRJ5 636 aaKnown RBP10.87□□□□□ -0.67
CLCN3-210ENST00000515420 ABCA2Q9BZC7 2435 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 TVP23AA6NH52 213 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 ZNF878C9JN71 531 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 PRR23D1E9PI22 279 aaPredicted RBP10.86□□□□□ -0.67
CLCN3-210ENST00000515420 M0R135 149 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 SURF4O15260 269 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 TPD52L2O43399 206 aaKnown RBP10.86□□□□□ -0.67
CLCN3-210ENST00000515420 GLCEO94923 617 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 PRR23D2P0DMB1 279 aaPredicted RBP10.86□□□□□ -0.67
CLCN3-210ENST00000515420 SELEP16581 610 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 TNFSF4P23510 183 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 POU1F1P28069 291 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 ERFP50548 548 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 ESRRGP62508 458 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 SLC3A1Q07837 685 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 DBPQ10586 325 aaPredicted RBP10.86□□□□□ -0.67
CLCN3-210ENST00000515420 CCNIQ14094 377 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 HFEQ30201 348 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 FAM166AQ6J272 317 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 ACSM5Q6NUN0 579 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 USP51Q70EK9 711 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 SHFQ7M4L6 423 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 DCXRQ7Z4W1 244 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 ZNF511Q8NB15 262 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 OR51L1Q8NGJ5 315 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 OR6K6Q8NGW6 343 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 ZNF799Q96GE5 643 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 PRRG3Q9BZD7 231 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 GABARAPL1Q9H0R8 117 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 ENOPH1Q9UHY7 261 aa10.86□□□□□ -0.67
CLCN3-210ENST00000515420 A0A1B0GWJ7 208 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 IQCF6A8MYZ5 107 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 CLDN25C9JDP6 229 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 F5H5K5 113 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 ZNF593O00488 134 aaPredicted RBP10.85□□□□□ -0.67
CLCN3-210ENST00000515420 SPRY3O43610 288 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 SPARCP09486 303 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 CLUP10909 449 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 ZNF16P17020 682 aaPredicted RBP10.85□□□□□ -0.67
CLCN3-210ENST00000515420 TNFRSF1AP19438 455 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 GSTT1P30711 240 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 SLC15A1P46059 708 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 CRISP1P54107 249 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 MALLQ13021 153 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 TSTQ16762 297 aaKnown RBP10.85□□□□□ -0.67
CLCN3-210ENST00000515420 SLC35D3Q5M8T2 416 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 LYPD4Q6UWN0 246 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 DRAM2Q6UX65 266 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 ZDHHC13Q8IUH4 622 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 OR8G5Q8NG78 346 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 ST7LQ8TDW4 575 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 MSI2Q96DH6 328 aaKnown RBP10.85□□□□□ -0.67
CLCN3-210ENST00000515420 SLAMF6Q96DU3 332 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 TIMD4Q96H15 378 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 PLEKHA8Q96JA3 519 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 INTS14Q96SY0 518 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 KCNJ15Q99712 375 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 OSBPL10Q9BXB5 764 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 HCAR1Q9BXC0 346 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 TOR3AQ9H497 397 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 OPA3Q9H6K4 179 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 MSL2Q9HCI7 577 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 PTTG3PQ9NZH4 202 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 LPAR3Q9UBY5 353 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 IL19Q9UHD0 177 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 CDC42EP3Q9UKI2 254 aa10.85□□□□□ -0.67
CLCN3-210ENST00000515420 KCNS2Q9ULS6 477 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms