RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 HAVCR1Q96D42 359 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 RBM4Q9BWF3 364 aaKnown RBP9.75□□□□□ -0.85
VCAN-212ENST00000515397 PNRC2Q9NPJ4 139 aaKnown RBP9.75□□□□□ -0.85
VCAN-212ENST00000515397 CENPMQ9NSP4 180 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 NKIRAS2Q9NYR9 191 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 KCNS2Q9ULS6 477 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 FBN1P35555 2871 aaKnown RBP9.74□□□□□ -0.85
VCAN-212ENST00000515397 TCRBV3S1A0A5B6 114 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 ZNF593O00488 134 aaPredicted RBP9.74□□□□□ -0.85
VCAN-212ENST00000515397 ZNF205O95201 554 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 LCATP04180 440 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 SPARCP09486 303 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 ACSM4P0C7M7 580 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 SLC2A1P11166 492 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 PRKXP51817 358 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 CDK5R2Q13319 367 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 GINS1Q14691 196 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 CR1LQ2VPA4 569 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 HFEQ30201 348 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 DCXRQ7Z4W1 244 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 LINC01356Q8N9X3 169 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 ATG16L2Q8NAA4 619 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 OR10AD1Q8NGE0 317 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 OR2T4Q8NH00 348 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 TEX47Q8TBZ9 253 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 ITLN1Q8WWA0 313 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 APOBEC3DQ96AK3 386 aaPredicted RBP9.74□□□□□ -0.85
VCAN-212ENST00000515397 ELMOD3Q96FG2 381 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 COQ7Q99807 217 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 NMNAT2Q9BZQ4 307 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 SHARPINQ9H0F6 387 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 HDHD2Q9H0R4 259 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 OR51V1Q9H2C8 321 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 NTN4Q9HB63 628 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 WIPI2Q9Y4P8 454 aa9.74□□□□□ -0.85
VCAN-212ENST00000515397 ISPDA4D126 451 aa9.73□□□□□ -0.85
VCAN-212ENST00000515397 RIIAD1A6NNX1 92 aa9.73□□□□□ -0.85
VCAN-212ENST00000515397 HLA-DPB1P04440 258 aa9.73□□□□□ -0.85
VCAN-212ENST00000515397 SELEP16581 610 aa9.73□□□□□ -0.85
VCAN-212ENST00000515397 KITLGP21583 273 aa9.73□□□□□ -0.85
VCAN-212ENST00000515397 FMO3P31513 532 aa9.73□□□□□ -0.85
VCAN-212ENST00000515397 CDH15P55291 814 aa9.73□□□□□ -0.85
VCAN-212ENST00000515397 MRPS11P82912 194 aaKnown RBP9.73□□□□□ -0.85
VCAN-212ENST00000515397 CD300LDQ6UXZ3 194 aa9.73□□□□□ -0.85
VCAN-212ENST00000515397 OR2AE1Q8NHA4 323 aa9.73□□□□□ -0.85
VCAN-212ENST00000515397 ATF6BQ99941 703 aa9.73□□□□□ -0.85
VCAN-212ENST00000515397 EGLN1Q9GZT9 426 aa9.73□□□□□ -0.85
VCAN-212ENST00000515397 CYSLTR2Q9NS75 346 aa9.73□□□□□ -0.85
VCAN-212ENST00000515397 UBAP1Q9NZ09 502 aa9.73□□□□□ -0.85
VCAN-212ENST00000515397 CDC42EP3Q9UKI2 254 aa9.73□□□□□ -0.85
VCAN-212ENST00000515397 COMMD3-BMI1R4GMX3 469 aa9.73□□□□□ -0.85
VCAN-212ENST00000515397 ARHGAP32A7KAX9 2087 aa9.73□□□□□ -0.85
VCAN-212ENST00000515397 CLDN25C9JDP6 229 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 F5H5P2 479 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 M0R135 149 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 MITFO75030 526 aaPredicted RBP9.72□□□□□ -0.85
VCAN-212ENST00000515397 IFNGP01579 166 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 SBK2P0C263 348 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 RAC2P15153 192 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 SLC6A9P48067 706 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 RGS6P49758 472 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 ENTPD1P49961 510 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 SLC25A1P53007 311 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 TPTEP56180 551 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 HOXA4Q00056 320 aaPredicted RBP9.72□□□□□ -0.85
VCAN-212ENST00000515397 GK2Q14410 553 aaPredicted RBP9.72□□□□□ -0.85
VCAN-212ENST00000515397 TAF13Q15543 124 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 SNAI3Q3KNW1 292 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 KRTAP27-1Q3LI81 207 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 FAM209AQ5JX71 171 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 LINC01590Q5TEZ4 76 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 PLBD1Q6P4A8 553 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 FBXW12Q6X9E4 464 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 COLCA1Q6ZS62 124 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 DPY19L4Q7Z388 723 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 AMIGO2Q86SJ2 522 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 ERI1Q8IV48 349 aaKnown RBP9.72□□□□□ -0.85
VCAN-212ENST00000515397 C1orf174Q8IYL3 243 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 PAPD5Q8NDF8 572 aaKnown RBP9.72□□□□□ -0.85
VCAN-212ENST00000515397 BBS1Q8NFJ9 593 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 OR5L1Q8NGL2 311 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 ZNF420Q8TAQ5 688 aaPredicted RBP9.72□□□□□ -0.85
VCAN-212ENST00000515397 HPS1Q92902 700 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 POP5Q969H6 163 aaKnown RBP9.72□□□□□ -0.85
VCAN-212ENST00000515397 SLAMF6Q96DU3 332 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 ZMYND19Q96E35 227 aaPredicted RBP9.72□□□□□ -0.85
VCAN-212ENST00000515397 ZNF799Q96GE5 643 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 OR2V2Q96R30 315 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 COPS4Q9BT78 406 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 C1QTNF5Q9BXJ0 243 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 ZNF665Q9H7R5 613 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 CMC2Q9NRP2 79 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 HIF1ANQ9NWT6 349 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 DNAJB9Q9UBS3 223 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 KCNG2Q9UJ96 466 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 ZDHHC8Q9ULC8 765 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 BAIAP2Q9UQB8 552 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 WNK2Q9Y3S1 2297 aa9.72□□□□□ -0.85
VCAN-212ENST00000515397 MXRA5Q9NR99 2828 aa9.71□□□□□ -0.85
VCAN-212ENST00000515397 B4DSR2 109 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms