RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 DBHP09172 617 aa18.16■□□□□ 0.5
LSM6-207ENST00000515311 TACSTD2P09758 323 aa18.16■□□□□ 0.5
LSM6-207ENST00000515311 ACSM4P0C7M7 580 aa18.16■□□□□ 0.5
LSM6-207ENST00000515311 CCL2P13500 99 aa18.16■□□□□ 0.5
LSM6-207ENST00000515311 PCSK6P29122 969 aa18.16■□□□□ 0.5
LSM6-207ENST00000515311 GALK2Q01415 458 aa18.16■□□□□ 0.5
LSM6-207ENST00000515311 SP5Q6BEB4 398 aaPredicted RBP18.16■□□□□ 0.5
LSM6-207ENST00000515311 ARL9Q6T311 187 aa18.16■□□□□ 0.5
LSM6-207ENST00000515311 TMPRSS11AQ6ZMR5 421 aa18.16■□□□□ 0.5
LSM6-207ENST00000515311 PAQR4Q8N4S7 273 aaPredicted RBP18.16■□□□□ 0.5
LSM6-207ENST00000515311 OR52N1Q8NH53 320 aa18.16■□□□□ 0.5
LSM6-207ENST00000515311 ZNF799Q96GE5 643 aa18.16■□□□□ 0.5
LSM6-207ENST00000515311 RADILQ96JH8 1075 aa18.16■□□□□ 0.5
LSM6-207ENST00000515311 NR1H4Q96RI1 486 aaPredicted RBP18.16■□□□□ 0.5
LSM6-207ENST00000515311 RTTNQ86VV8 2226 aa18.15■□□□□ 0.5
LSM6-207ENST00000515311 ABCD4O14678 606 aa18.15■□□□□ 0.5
LSM6-207ENST00000515311 CD3EP07766 207 aa18.15■□□□□ 0.5
LSM6-207ENST00000515311 HTR1AP08908 422 aa18.15■□□□□ 0.5
LSM6-207ENST00000515311 COX6B1P14854 86 aa18.15■□□□□ 0.5
LSM6-207ENST00000515311 CCNOP22674 350 aa18.15■□□□□ 0.5
LSM6-207ENST00000515311 LOXP28300 417 aaPredicted RBP18.15■□□□□ 0.5
LSM6-207ENST00000515311 CALCRP30988 508 aa18.15■□□□□ 0.5
LSM6-207ENST00000515311 PSMA6P60900 246 aaKnown RBP18.15■□□□□ 0.5
LSM6-207ENST00000515311 TP53I3Q53FA7 332 aa18.15■□□□□ 0.5
LSM6-207ENST00000515311 KLHL36Q8N4N3 616 aa18.15■□□□□ 0.5
LSM6-207ENST00000515311 YIPF7Q8N8F6 280 aa18.15■□□□□ 0.5
LSM6-207ENST00000515311 DOK1Q99704 481 aa18.15■□□□□ 0.5
LSM6-207ENST00000515311 CLEC2DQ9UHP7 191 aa18.15■□□□□ 0.5
LSM6-207ENST00000515311 GNG8Q9UK08 70 aa18.15■□□□□ 0.5
LSM6-207ENST00000515311 CADP27708 2225 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 J3QW42 95 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 MAGEB4O15481 346 aaPredicted RBP18.14■□□□□ 0.49
LSM6-207ENST00000515311 WNT5AP41221 380 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 CX3CR1P49238 355 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 RGS6P49758 472 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 PRKXP51817 358 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 OR12D2P58182 307 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 HGFACQ04756 655 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 MRPL28Q13084 256 aaKnown RBP18.14■□□□□ 0.49
LSM6-207ENST00000515311 IRF3Q14653 427 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 ZNF829Q3KNS6 432 aaPredicted RBP18.14■□□□□ 0.49
LSM6-207ENST00000515311 LIPNQ5VXI9 398 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 UNQ6126/PRO20091Q6UXV3 157 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 COLCA1Q6ZS62 124 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 HAVCR2Q8TDQ0 301 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 C4orf36Q96KX1 117 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 C4orf45Q96LM5 186 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 TMEM204Q9BSN7 226 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 MND1Q9BWT6 205 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 SP140LQ9H930 580 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 ACOXLQ9NUZ1 547 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 TBCCD1Q9NVR7 557 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 EIF3KQ9UBQ5 218 aaKnown RBP18.14■□□□□ 0.49
LSM6-207ENST00000515311 ERGIC3Q9Y282 383 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 GRIP1Q9Y3R0 1128 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 RNF115Q9Y4L5 304 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 SPEF1Q9Y4P9 236 aa18.14■□□□□ 0.49
LSM6-207ENST00000515311 ACOD1A6NK06 481 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 A6NNC1 897 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 ATP6V1G2-DDX39BF2Z307 99 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 J3QLW9 94 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 MYL12BO14950 172 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 MT-ND2P03891 347 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 MT-ND5P03915 603 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 ZNF19P17023 458 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 SLC6A9P48067 706 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 MMP16P51512 607 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 SPOCK1Q08629 439 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 C1orf174Q8IYL3 243 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 ZNF283Q8N7M2 679 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 NANOGP1Q8N7R0 232 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 ZNF485Q8NCK3 441 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 APOBEC3DQ96AK3 386 aaPredicted RBP18.13■□□□□ 0.49
LSM6-207ENST00000515311 PIK3IP1Q96FE7 263 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 C1QTNF5Q9BXJ0 243 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 CCDC90BQ9GZT6 254 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 ZNF696Q9H7X3 374 aa18.13■□□□□ 0.49
LSM6-207ENST00000515311 ISG20L2Q9H9L3 353 aaKnown RBP18.13■□□□□ 0.49
LSM6-207ENST00000515311 PLEKHB1Q9UF11 243 aaPredicted RBP18.13■□□□□ 0.49
LSM6-207ENST00000515311 SRSF10O75494 262 aaKnown RBP18.12■□□□□ 0.49
LSM6-207ENST00000515311 NR4A1P22736 598 aa18.12■□□□□ 0.49
LSM6-207ENST00000515311 RAD52P43351 418 aa18.12■□□□□ 0.49
LSM6-207ENST00000515311 UCP2P55851 309 aa18.12■□□□□ 0.49
LSM6-207ENST00000515311 ZNF121P58317 390 aaPredicted RBP18.12■□□□□ 0.49
LSM6-207ENST00000515311 ZNF773Q6PK81 442 aa18.12■□□□□ 0.49
LSM6-207ENST00000515311 SLC22A25Q6T423 547 aa18.12■□□□□ 0.49
LSM6-207ENST00000515311 PRSS45Q7RTY3 260 aa18.12■□□□□ 0.49
LSM6-207ENST00000515311 NUP37Q8NFH4 326 aa18.12■□□□□ 0.49
LSM6-207ENST00000515311 PELI1Q96FA3 418 aa18.12■□□□□ 0.49
LSM6-207ENST00000515311 BCL2L14Q9BZR8 327 aa18.12■□□□□ 0.49
LSM6-207ENST00000515311 MOB1AQ9H8S9 216 aa18.12■□□□□ 0.49
LSM6-207ENST00000515311 FAM206AQ9NX38 181 aa18.12■□□□□ 0.49
LSM6-207ENST00000515311 R4GMQ9 66 aa18.12■□□□□ 0.49
LSM6-207ENST00000515311 PKDREJQ9NTG1 2253 aa18.12■□□□□ 0.49
LSM6-207ENST00000515311 TMEM269A0A1B0GVZ9 245 aa18.11■□□□□ 0.49
LSM6-207ENST00000515311 SMPD2O60906 423 aa18.11■□□□□ 0.49
LSM6-207ENST00000515311 TUBG1P23258 451 aa18.11■□□□□ 0.49
LSM6-207ENST00000515311 WNT4P56705 351 aa18.11■□□□□ 0.49
LSM6-207ENST00000515311 NKX6-1P78426 367 aaPredicted RBP18.11■□□□□ 0.49
LSM6-207ENST00000515311 TBCEQ15813 527 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms