RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 IMPDH1P20839 514 aa2.57□□□□□ -2
CHD1-211ENST00000514344 POU1F1P28069 291 aa2.57□□□□□ -2
CHD1-211ENST00000514344 CHI3L1P36222 383 aaPredicted RBP2.57□□□□□ -2
CHD1-211ENST00000514344 GSK3BP49841 420 aa2.57□□□□□ -2
CHD1-211ENST00000514344 WDR4P57081 412 aaKnown RBP2.57□□□□□ -2
CHD1-211ENST00000514344 CALCOCO2Q13137 446 aa2.57□□□□□ -2
CHD1-211ENST00000514344 AANATQ16613 207 aa2.57□□□□□ -2
CHD1-211ENST00000514344 RABL3Q5HYI8 236 aa2.57□□□□□ -2
CHD1-211ENST00000514344 ALG10BQ5I7T1 473 aa2.57□□□□□ -2
CHD1-211ENST00000514344 OR4F3Q6IEY1 312 aa2.57□□□□□ -2
CHD1-211ENST00000514344 LCNL1Q6ZST4 164 aa2.57□□□□□ -2
CHD1-211ENST00000514344 PEX5LQ8IYB4 626 aa2.57□□□□□ -2
CHD1-211ENST00000514344 ZNF440Q8IYI8 595 aa2.57□□□□□ -2
CHD1-211ENST00000514344 SLC35F6Q8N357 371 aa2.57□□□□□ -2
CHD1-211ENST00000514344 LNX2Q8N448 690 aa2.57□□□□□ -2
CHD1-211ENST00000514344 MAPKAPK5-AS1Q8N8E1 139 aa2.57□□□□□ -2
CHD1-211ENST00000514344 OR4A15Q8NGL6 344 aa2.57□□□□□ -2
CHD1-211ENST00000514344 OR52P1PQ8NH57 321 aa2.57□□□□□ -2
CHD1-211ENST00000514344 OR6X1Q8NH79 312 aa2.57□□□□□ -2
CHD1-211ENST00000514344 SLC41A3Q96GZ6 507 aa2.57□□□□□ -2
CHD1-211ENST00000514344 DUSP26Q9BV47 211 aa2.57□□□□□ -2
CHD1-211ENST00000514344 SIAEQ9HAT2 523 aa2.57□□□□□ -2
CHD1-211ENST00000514344 POLE3Q9NRF9 147 aa2.57□□□□□ -2
CHD1-211ENST00000514344 RPS6KB2Q9UBS0 482 aa2.57□□□□□ -2
CHD1-211ENST00000514344 MARCOQ9UEW3 520 aaPredicted RBP2.57□□□□□ -2
CHD1-211ENST00000514344 LINC00527Q9UJ94 153 aa2.57□□□□□ -2
CHD1-211ENST00000514344 PRPF19Q9UMS4 504 aaKnown RBP2.57□□□□□ -2
CHD1-211ENST00000514344 IGKV1D-43A0A0B4J1Z2 117 aa2.56□□□□□ -2
CHD1-211ENST00000514344 PSMB11A5LHX3 300 aa2.56□□□□□ -2
CHD1-211ENST00000514344 H3BSH0 61 aa2.56□□□□□ -2
CHD1-211ENST00000514344 LSM1O15116 133 aaKnown RBP2.56□□□□□ -2
CHD1-211ENST00000514344 NDUFB3O43676 98 aa2.56□□□□□ -2
CHD1-211ENST00000514344 NDUFA2O43678 99 aa2.56□□□□□ -2
CHD1-211ENST00000514344 PEX11AO75192 247 aa2.56□□□□□ -2
CHD1-211ENST00000514344 CPSF4O95639 269 aaKnown RBP2.56□□□□□ -2
CHD1-211ENST00000514344 AGR2O95994 175 aa2.56□□□□□ -2
CHD1-211ENST00000514344 IGHG1P01857 330 aa2.56□□□□□ -2
CHD1-211ENST00000514344 DBIP07108 87 aaKnown RBP2.56□□□□□ -2
CHD1-211ENST00000514344 GRPP07492 148 aa2.56□□□□□ -2
CHD1-211ENST00000514344 NR2F1P10589 423 aa2.56□□□□□ -2
CHD1-211ENST00000514344 RAC2P15153 192 aa2.56□□□□□ -2
CHD1-211ENST00000514344 TAC1P20366 129 aa2.56□□□□□ -2
CHD1-211ENST00000514344 GP2P55259 537 aaKnown RBP2.56□□□□□ -2
CHD1-211ENST00000514344 CD47Q08722 323 aa2.56□□□□□ -2
CHD1-211ENST00000514344 BLMHQ13867 455 aa2.56□□□□□ -2
CHD1-211ENST00000514344 WDR38Q5JTN6 314 aa2.56□□□□□ -2
CHD1-211ENST00000514344 ZNF782Q6ZMW2 699 aaPredicted RBP2.56□□□□□ -2
CHD1-211ENST00000514344 PIGWQ7Z7B1 504 aa2.56□□□□□ -2
CHD1-211ENST00000514344 ZNF695Q8IW36 515 aa2.56□□□□□ -2
CHD1-211ENST00000514344 MKXQ8IYA7 352 aa2.56□□□□□ -2
CHD1-211ENST00000514344 GCSAMQ8N6F7 178 aa2.56□□□□□ -2
CHD1-211ENST00000514344 CCDC63Q8NA47 563 aa2.56□□□□□ -2
CHD1-211ENST00000514344 NPEPL1Q8NDH3 523 aa2.56□□□□□ -2
CHD1-211ENST00000514344 OIT3Q8WWZ8 545 aa2.56□□□□□ -2
CHD1-211ENST00000514344 PTP4A1Q93096 173 aa2.56□□□□□ -2
CHD1-211ENST00000514344 NOL4LQ96MY1 436 aaPredicted RBP2.56□□□□□ -2
CHD1-211ENST00000514344 ZNF583Q96ND8 569 aa2.56□□□□□ -2
CHD1-211ENST00000514344 HIPK2Q9H2X6 1198 aa2.56□□□□□ -2
CHD1-211ENST00000514344 GSTO2Q9H4Y5 243 aa2.56□□□□□ -2
CHD1-211ENST00000514344 MTHFD2LQ9H903 347 aaPredicted RBP2.56□□□□□ -2
CHD1-211ENST00000514344 ELL3Q9HB65 397 aaPredicted RBP2.56□□□□□ -2
CHD1-211ENST00000514344 TMEM100Q9NV29 134 aa2.56□□□□□ -2
CHD1-211ENST00000514344 TMEM216Q9P0N5 145 aa2.56□□□□□ -2
CHD1-211ENST00000514344 KLHL14Q9P2G3 628 aa2.56□□□□□ -2
CHD1-211ENST00000514344 HILPDAQ9Y5L2 63 aa2.56□□□□□ -2
CHD1-211ENST00000514344 MYCBP2O75592 4640 aa2.56□□□□□ -2
CHD1-211ENST00000514344 MEX3AA1L020 520 aaKnown RBP2.56□□□□□ -2
CHD1-211ENST00000514344 SMIM23A6NLE4 172 aa2.56□□□□□ -2
CHD1-211ENST00000514344 TMEM114B3SHH9 223 aa2.56□□□□□ -2
CHD1-211ENST00000514344 TMEM233B4DJY2 109 aa2.56□□□□□ -2
CHD1-211ENST00000514344 MCIDASD6RGH6 385 aa2.56□□□□□ -2
CHD1-211ENST00000514344 DOK2O60496 412 aa2.56□□□□□ -2
CHD1-211ENST00000514344 ICMTO60725 284 aa2.56□□□□□ -2
CHD1-211ENST00000514344 DBHP09172 617 aa2.56□□□□□ -2
CHD1-211ENST00000514344 GP9P14770 177 aa2.56□□□□□ -2
CHD1-211ENST00000514344 NDUFB7P17568 137 aa2.56□□□□□ -2
CHD1-211ENST00000514344 HAGHQ16775 308 aa2.56□□□□□ -2
CHD1-211ENST00000514344 MICBQ29980 383 aa2.56□□□□□ -2
CHD1-211ENST00000514344 RPS26P11Q5JNZ5 115 aaPredicted RBP2.56□□□□□ -2
CHD1-211ENST00000514344 RNLSQ5VYX0 342 aa2.56□□□□□ -2
CHD1-211ENST00000514344 CYS1Q717R9 158 aa2.56□□□□□ -2
CHD1-211ENST00000514344 NET1Q7Z628 596 aaPredicted RBP2.56□□□□□ -2
CHD1-211ENST00000514344 ZNF575Q86XF7 245 aa2.56□□□□□ -2
CHD1-211ENST00000514344 OSR2Q8N2R0 312 aa2.56□□□□□ -2
CHD1-211ENST00000514344 ADPRHL1Q8NDY3 354 aa2.56□□□□□ -2
CHD1-211ENST00000514344 Q8TCH9 128 aa2.56□□□□□ -2
CHD1-211ENST00000514344 FBXO25Q8TCJ0 367 aa2.56□□□□□ -2
CHD1-211ENST00000514344 MIPOL1Q8TD10 442 aa2.56□□□□□ -2
CHD1-211ENST00000514344 ST6GALNAC6Q969X2 333 aa2.56□□□□□ -2
CHD1-211ENST00000514344 NABP1Q96AH0 204 aa2.56□□□□□ -2
CHD1-211ENST00000514344 MPP4Q96JB8 637 aa2.56□□□□□ -2
CHD1-211ENST00000514344 CCDC115Q96NT0 180 aa2.56□□□□□ -2
CHD1-211ENST00000514344 TRNT1Q96Q11 434 aaKnown RBP2.56□□□□□ -2
CHD1-211ENST00000514344 SNTG1Q9NSN8 517 aa2.56□□□□□ -2
CHD1-211ENST00000514344 C1orf123Q9NWV4 160 aa2.56□□□□□ -2
CHD1-211ENST00000514344 MRPL39Q9NYK5 338 aaKnown RBP2.56□□□□□ -2
CHD1-211ENST00000514344 ADA2Q9NZK5 511 aa2.56□□□□□ -2
CHD1-211ENST00000514344 VSX1Q9NZR4 365 aaPredicted RBP2.56□□□□□ -2
CHD1-211ENST00000514344 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.56□□□□□ -2
CHD1-211ENST00000514344 TIMM10BQ9Y5J6 103 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms