RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ACSM4P0C7M7 580 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 DANCRP0C864 163 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 COX5BP10606 129 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 ALOX5APP20292 161 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 NR4A1P22736 598 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 PAX7P23759 505 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 ATP6V1E1P36543 226 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 CDKN1AP38936 164 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 MPV17P39210 176 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 MTNR1AP48039 350 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 CX3CR1P49238 355 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 UCP2P55851 309 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 CXCR4P61073 352 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 PPP1CBP62140 327 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 SNAI3Q3KNW1 292 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 KRTAP27-1Q3LI81 207 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 LINC01559Q495D7 138 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 LAIR2Q6ISS4 152 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 USP51Q70EK9 711 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 CDH24Q86UP0 819 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 C8orf59Q8N0T1 100 aaPredicted RBP8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 ZNF283Q8N7M2 679 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 ZNF611Q8N823 705 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 SETD9Q8NE22 299 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 NUP37Q8NFH4 326 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 IL17RDQ8NFM7 739 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 SLC25A40Q8TBP6 338 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 RNF133Q8WVZ7 376 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 IPCEF1Q8WWN9 437 aaPredicted RBP8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 GTF3AQ92664 365 aaKnown RBP8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 TFAP2CQ92754 450 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 RFKQ969G6 155 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 LGALS12Q96DT0 336 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 ZNF799Q96GE5 643 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 CCL19Q99731 98 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 WACQ9BTA9 647 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 MRPL37Q9BZE1 423 aaKnown RBP8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 OR2J1Q9GZK6 312 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 YIPF3Q9GZM5 350 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 VCX3BQ9H321 246 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 SLCO1C1Q9NYB5 712 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 ST6GALNAC2Q9UJ37 374 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 FBXO9Q9UK97 447 aaPredicted RBP8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 IKZF2Q9UKS7 526 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 LRP12Q9Y561 859 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 PCDHGB5Q9Y5G0 923 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 ANKRD17O75179 2603 aaKnown RBP8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 RNF223E7ERA6 249 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 ZNF670-ZNF695F2Z2N8 137 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 H0YAE9 185 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 XPNPEP2O43895 674 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 MPZL2O60487 215 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 ATE1O95260 518 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 SCGB1D2O95969 90 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 CD8AP01732 235 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 LCATP04180 440 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 ANXA2P07355 339 aaKnown RBP8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 H2BFMP0C1H6 154 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 CD53P19397 219 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 HSD11B1P28845 292 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 TTKP33981 857 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 OPRL1P41146 370 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 ISL1P61371 349 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 ZNF85Q03923 595 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 HLXQ14774 488 aaPredicted RBP8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 SNCBQ16143 134 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 TM4SF20Q53R12 229 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 SLC25A30Q5SVS4 291 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 MEDAGQ5VYS4 303 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 RGS7BPQ6MZT1 257 aaPredicted RBP8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 KRT77Q7Z794 578 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 THNSL2Q86YJ6 484 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 FBXL14Q8N1E6 418 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 MUC15Q8N387 334 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 OR52I1Q8NGK6 324 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 OR2AE1Q8NHA4 323 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 CNBD2Q96M20 576 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 OR8B4Q96RC9 309 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 KCNJ15Q99712 375 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 TRAF4Q9BUZ4 470 aaPredicted RBP8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 ZNF442Q9H7R0 627 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 HAO2Q9NYQ3 351 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 EIF3KQ9UBQ5 218 aaKnown RBP8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 ATPIF1Q9UII2 106 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 DUSP13Q9UII6 198 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 MYRFQ9Y2G1 1151 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 STARD10Q9Y365 291 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 SPEF1Q9Y4P9 236 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 DSCAMO60469 2012 aa8.42□□□□□ -1.06
TOPBP1-209ENST00000513818 A0A1W2PPW3 197 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 A0A1W2PQL4 384 aaPredicted RBP8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 TBX1O43435 398 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 FAM20BO75063 409 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 NDUFS7O75251 213 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 BPNT1O95861 308 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 RAF1P04049 648 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 PCSK6P29122 969 aa8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 APOBEC3AP31941 199 aaPredicted RBP8.41□□□□□ -1.06
TOPBP1-209ENST00000513818 GLRXP35754 106 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms