RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 OR5R1Q8NH85 324 aa9.54□□□□□ -0.88
RNF4-216ENST00000511859 NFKBIDQ8NI38 313 aa9.54□□□□□ -0.88
RNF4-216ENST00000511859 NSMAFQ92636 917 aa9.54□□□□□ -0.88
RNF4-216ENST00000511859 TECTBQ96PL2 329 aa9.54□□□□□ -0.88
RNF4-216ENST00000511859 ECSITQ9BQ95 431 aa9.54□□□□□ -0.88
RNF4-216ENST00000511859 POFUT1Q9H488 388 aa9.54□□□□□ -0.88
RNF4-216ENST00000511859 CMTM6Q9NX76 183 aa9.54□□□□□ -0.88
RNF4-216ENST00000511859 ADA2Q9NZK5 511 aa9.54□□□□□ -0.88
RNF4-216ENST00000511859 ZNRD1Q9P1U0 126 aa9.54□□□□□ -0.88
RNF4-216ENST00000511859 CORO2BQ9UQ03 480 aa9.54□□□□□ -0.88
RNF4-216ENST00000511859 STARD10Q9Y365 291 aa9.54□□□□□ -0.88
RNF4-216ENST00000511859 C12orf71A8MTZ7 269 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 NME4O00746 187 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 F13BP05160 661 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 GPX2P18283 190 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 GATA4P43694 442 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 MNAT1P51948 309 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 EFNB2P52799 333 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 DEFB121Q5J5C9 76 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 FAM201AQ5SY85 155 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 ARMC4Q5T2S8 1044 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 GCNT6Q5T4J0 391 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 C8orf82Q6P1X6 216 aaPredicted RBP9.53□□□□□ -0.88
RNF4-216ENST00000511859 SLC25A47Q6Q0C1 308 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 CCBE1Q6UXH8 406 aaPredicted RBP9.53□□□□□ -0.88
RNF4-216ENST00000511859 HACD2Q6Y1H2 254 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 IGFN1Q86VF2 1251 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 SLC15A3Q8IY34 581 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 C11orf44Q8N8P7 122 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 DTX3Q8N9I9 347 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 OR4F17Q8NGA8 305 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 OR8J3Q8NGG0 315 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 FNDC8Q8TC99 324 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 ERGIC1Q969X5 290 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 NMD3Q96D46 503 aaKnown RBP9.53□□□□□ -0.88
RNF4-216ENST00000511859 MPP4Q96JB8 637 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 ZNF582Q96NG8 517 aaPredicted RBP9.53□□□□□ -0.88
RNF4-216ENST00000511859 RBP7Q96R05 134 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 OR4F4Q96R69 305 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 MCHR1Q99705 422 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 WFDC6Q9BQY6 131 aa9.53□□□□□ -0.88
RNF4-216ENST00000511859 KAT8Q9H7Z6 458 aaKnown RBP9.53□□□□□ -0.88
RNF4-216ENST00000511859 IGKV1D-43A0A0B4J1Z2 117 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 J3QW42 95 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 K7EIL1 84 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 NDUFA2O43678 99 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 AQP1P29972 269 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 PMELP40967 661 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 ARF6P62330 175 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 CDK6Q00534 326 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 LIPEQ05469 1076 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 RPL18Q07020 188 aaKnown RBP9.52□□□□□ -0.88
RNF4-216ENST00000511859 CD47Q08722 323 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 SCARB2Q14108 478 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 C16orf89Q6UX73 402 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 SLC30A8Q8IWU4 369 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 OR5AS1Q8N127 324 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 FAM156AQ8NDB6 213 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 OR10AD1Q8NGE0 317 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 ITPKCQ96DU7 683 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 ZNF583Q96ND8 569 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 CDRT15Q96T59 188 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 SH3GL1Q99961 368 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 HOPXQ9BPY8 73 aaPredicted RBP9.52□□□□□ -0.88
RNF4-216ENST00000511859 INIPQ9NRY2 104 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 FOXJ3Q9UPW0 622 aa9.52□□□□□ -0.88
RNF4-216ENST00000511859 A0A1B0GVI7 797 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 NPIPB13A6NJU9 1138 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 NPIPB4C9JG80 1138 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 EBAG9O00559 213 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 ECDO95905 644 aaPredicted RBP9.51□□□□□ -0.89
RNF4-216ENST00000511859 MSX2P35548 267 aaPredicted RBP9.51□□□□□ -0.89
RNF4-216ENST00000511859 GSK3BP49841 420 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 GZMMP51124 257 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 FMODQ06828 376 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 BNIP1Q12981 228 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 ENTPD8Q5MY95 495 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 METAP1DQ6UB28 335 aaPredicted RBP9.51□□□□□ -0.89
RNF4-216ENST00000511859 FBXW12Q6X9E4 464 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 CCDC121Q6ZUS5 278 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 ARPINQ7Z6K5 226 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 ARMC8Q8IUR7 673 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 PGAM4Q8N0Y7 254 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 CELF2-AS1Q8N7Q2 184 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 WFDC9Q8NEX5 89 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 OR5L1Q8NGL2 311 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 OR11L1Q8NGX0 322 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 OR2T6Q8NHC8 308 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 Q8TCH9 128 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 HDAC2Q92769 488 aaKnown RBP9.51□□□□□ -0.89
RNF4-216ENST00000511859 SLC7A6OSQ96CW6 309 aaPredicted RBP9.51□□□□□ -0.89
RNF4-216ENST00000511859 ZNF426Q9BUY5 554 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 ALG12Q9BV10 488 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 PCDHAC1Q9H158 963 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 PPA2Q9H2U2 334 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 TOR3AQ9H497 397 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 CNTD2Q9H8S5 307 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 SPAG4Q9NPE6 437 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 TAS2R1Q9NYW7 299 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 TMCC3Q9ULS5 477 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms