RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 SLC38A5Q8WUX1 472 aa8.63□□□□□ -1.03
SNF8-207ENST00000509995 ASB10Q8WXI3 467 aa8.63□□□□□ -1.03
SNF8-207ENST00000509995 NMD3Q96D46 503 aaKnown RBP8.63□□□□□ -1.03
SNF8-207ENST00000509995 PTTG3PQ9NZH4 202 aa8.63□□□□□ -1.03
SNF8-207ENST00000509995 PRPF19Q9UMS4 504 aaKnown RBP8.63□□□□□ -1.03
SNF8-207ENST00000509995 CAPN7Q9Y6W3 813 aa8.63□□□□□ -1.03
SNF8-207ENST00000509995 CCDC154A6NI56 674 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 DOK2O60496 412 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 SASH3O75995 380 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 FRMD6-AS1P0C7T7 363 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 ACADSP16219 412 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 MYF6P23409 242 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 GP2P55259 537 aaKnown RBP8.62□□□□□ -1.03
SNF8-207ENST00000509995 POU4F2Q12837 409 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 ENDOGQ14249 297 aaKnown RBP8.62□□□□□ -1.03
SNF8-207ENST00000509995 ZNF74Q16587 644 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 PLA1AQ53H76 456 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 RABL3Q5HYI8 236 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 C10orf99Q6UWK7 81 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 COLCA1Q6ZS62 124 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 HDDC2Q7Z4H3 204 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 RANBP3LQ86VV4 465 aaPredicted RBP8.62□□□□□ -1.03
SNF8-207ENST00000509995 ACMSDQ8TDX5 336 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 LINC00476Q8WZB0 136 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 TESCQ96BS2 214 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 RASD2Q96D21 266 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 TMEM19Q96HH6 336 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 P2RX4Q99571 388 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 CPPED1Q9BRF8 314 aaPredicted RBP8.62□□□□□ -1.03
SNF8-207ENST00000509995 TM2D3Q9BRN9 247 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 NUF2Q9BZD4 464 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 RAB17Q9H0T7 212 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 ASIC5Q9NY37 505 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 PITPNC1Q9UKF7 332 aa8.62□□□□□ -1.03
SNF8-207ENST00000509995 ZNF256Q9Y2P7 627 aaPredicted RBP8.62□□□□□ -1.03
SNF8-207ENST00000509995 IGHV3OR15-7A0A075B7D8 119 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 A0A0G2JPF8 293 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 GMNCA6NCL1 334 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 HNRNPCL2B2RXH8 293 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 HNRNPCL3B7ZW38 293 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 HNRNPCL1O60812 293 aaKnown RBP8.61□□□□□ -1.03
SNF8-207ENST00000509995 CHRNGP07510 517 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 HNRNPCL4P0DMR1 293 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 RAB13P51153 203 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 NCALDP61601 193 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 SLC7A5Q01650 507 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 CD47Q08722 323 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 MAD2L1Q13257 205 aaPredicted RBP8.61□□□□□ -1.03
SNF8-207ENST00000509995 SPANXN4Q5MJ08 99 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 TEX36Q5VZQ5 186 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 SYT9Q86SS6 491 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 GCSAMQ8N6F7 178 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 FAM216BQ8N7L0 139 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 PCYOX1LQ8NBM8 494 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 OR52H1Q8NGJ2 320 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 AGR3Q8TD06 166 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 SLC7A6Q92536 515 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 KCNK9Q9NPC2 374 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 ZDHHC18Q9NUE0 388 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 DCDC2Q9UHG0 476 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 BTNL2Q9UIR0 455 aa8.61□□□□□ -1.03
SNF8-207ENST00000509995 A0A1W2PRG6 482 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 C12orf71A8MTZ7 269 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 SLC25A17O43808 307 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 PLIN3O60664 434 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 PTBP3O95758 552 aaKnown RBP8.6□□□□□ -1.03
SNF8-207ENST00000509995 CH25HO95992 272 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 NR2C1P13056 603 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 MYCNOSP40205 109 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 CDKN2CP42773 168 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 DAP3P51398 398 aaKnown RBP8.6□□□□□ -1.03
SNF8-207ENST00000509995 MVDP53602 400 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 CDH12P55289 794 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 DSTNP60981 165 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 ELF3P78545 371 aaPredicted RBP8.6□□□□□ -1.03
SNF8-207ENST00000509995 EMX2Q04743 252 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 ECH1Q13011 328 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 IKZF1Q13422 519 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 BLMHQ13867 455 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 OR1Q1Q15612 314 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 DPY19L1Q2PZI1 675 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 WDR38Q5JTN6 314 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 BEND6Q5SZJ8 279 aaPredicted RBP8.6□□□□□ -1.03
SNF8-207ENST00000509995 SWT1Q5T5J6 900 aaKnown RBP8.6□□□□□ -1.03
SNF8-207ENST00000509995 C9orf66Q5T8R8 295 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 SLC25A47Q6Q0C1 308 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 C8orf86Q6ZUL3 223 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 FOXL2NBQ6ZUU3 175 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 SLC36A1Q7Z2H8 476 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 SLC30A8Q8IWU4 369 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 OR5L1Q8NGL2 311 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 OR5D13Q8NGL4 314 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 RPS4Y2Q8TD47 263 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 H1FXQ92522 213 aaKnown RBP8.6□□□□□ -1.03
SNF8-207ENST00000509995 HDAC2Q92769 488 aaKnown RBP8.6□□□□□ -1.03
SNF8-207ENST00000509995 LYZL4Q96KX0 146 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 PANX1Q96RD7 426 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 CCL13Q99616 98 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 SLCO1B3Q9NPD5 702 aa8.6□□□□□ -1.03
SNF8-207ENST00000509995 ZNF229Q9UJW7 825 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms