RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 PLPPR5Q32ZL2 321 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 ZNF260Q3ZCT1 412 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 RNASE10Q5GAN6 216 aaKnown RBP15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 ALKAL2Q6UX46 152 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 CPEB2Q7Z5Q1 589 aaKnown RBP15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 FJX1Q86VR8 437 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 STEAP2Q8NFT2 490 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 OR52N4Q8NGI2 321 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 WDR77Q9BQA1 342 aaPredicted RBP15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 EDEM2Q9BV94 578 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 MRPL13Q9BYD1 178 aaKnown RBP15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 MFFQ9GZY8 342 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 B3GAT1Q9P2W7 334 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 RARRES3Q9UL19 164 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 POLR1DQ9Y2S0 133 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 RHBDD3Q9Y3P4 386 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 SESN1Q9Y6P5 492 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 CPED1A4D0V7 1026 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 EFNA2O43921 213 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 IGHG1P01857 330 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 RPA2P15927 270 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 RAB3AP20336 220 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 CDNFQ49AH0 187 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 LIN54Q6MZP7 749 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 TRAPPC6BQ86SZ2 158 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 OR2AJ1Q8NGZ0 328 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 COQ8AQ8NI60 647 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 SLC6A7Q99884 636 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 SEC61A2Q9H9S3 476 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 WIF1Q9Y5W5 379 aa15.96■□□□□ 0.15
CCHCR1-228ENST00000509552 LAMA1P25391 3075 aa15.96■□□□□ 0.14
CCHCR1-228ENST00000509552 RAB27BO00194 218 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 CSN2P05814 226 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 ERCC1P07992 297 aaPredicted RBP15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 POU3F2P20265 443 aaPredicted RBP15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 CALCRP30988 508 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 CLDN6P56747 220 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 FGL1Q08830 312 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 NR0B2Q15466 257 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 C3orf33Q6P1S2 294 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 BEST3Q8N1M1 668 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 ADPRHL1Q8NDY3 354 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 OR4S1Q8NGB4 309 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 OR1J2Q8NGS2 313 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 ADAT3Q96EY9 351 aaPredicted RBP15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 TTYH1Q9H313 450 aaPredicted RBP15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 MOB1AQ9H8S9 216 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 MED9Q9NWA0 146 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 MYOTQ9UBF9 498 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 HRH3Q9Y5N1 445 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 CABIN1Q9Y6J0 2220 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 PNLIPP16233 465 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 ZNF20P17024 532 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 CD34P28906 385 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 AGTR1P30556 359 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 SHBQ15464 509 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 SMAD2Q15796 467 aaKnown RBP15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 NKPD1Q17RQ9 610 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 LPCAT3Q6P1A2 487 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 CD163Q86VB7 1156 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 NOXO1Q8NFA2 376 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 OR10G3Q8NGC4 313 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 OR13C8Q8NGS7 320 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 POC1BQ8TC44 478 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 SLC22A8Q8TCC7 542 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 SDHAF2Q9NX18 166 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 SLC2A8Q9NY64 477 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 PFDN2Q9UHV9 154 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 PRUNE2Q8WUY3 3088 aa15.95■□□□□ 0.14
CCHCR1-228ENST00000509552 SDK1Q7Z5N4 2213 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 IGLV3-32A0A0A0MS00 114 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 ZNF878C9JN71 531 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 OR2J2O76002 312 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 NMBP08949 121 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 CXADRP78310 365 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 DHRS2Q13268 280 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 ZMYND11Q15326 602 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 TAF13Q15543 124 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 RGS7BPQ6MZT1 257 aaPredicted RBP15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 GPAT4Q86UL3 456 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 PAQR4Q8N4S7 273 aaPredicted RBP15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 OR10S1Q8NGN2 331 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 CRB3Q9BUF7 120 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 PTGES2Q9H7Z7 377 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 C19orf25Q9UFG5 118 aaPredicted RBP15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 SLC5A6Q9Y289 635 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 NOP16Q9Y3C1 178 aaKnown RBP15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 SCO1O75880 301 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 HLA-AP01891 365 aaKnown RBP15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 UNC119Q13432 240 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 LY6G6FQ5SQ64 297 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 TMEM65Q6PI78 240 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 SLC51BQ86UW2 128 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 OR13C9Q8NGT0 318 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 OR6K3Q8NGY3 331 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 DUSP23Q9BVJ7 150 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 TMEM185BQ9H7F4 350 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 IFT46Q9NQC8 304 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 WNT16Q9UBV4 365 aa15.94■□□□□ 0.14
CCHCR1-228ENST00000509552 PLEKHA6Q9Y2H5 1048 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms