RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 FAM9CQ8IZT9 166 aa3.84□□□□□ -1.79
CHD1-205ENST00000508756 PDIK1LQ8N165 341 aa3.84□□□□□ -1.79
CHD1-205ENST00000508756 ARHGAP18Q8N392 663 aa3.84□□□□□ -1.79
CHD1-205ENST00000508756 RNF182Q8N6D2 247 aa3.84□□□□□ -1.79
CHD1-205ENST00000508756 ZNF709Q8N972 641 aa3.84□□□□□ -1.79
CHD1-205ENST00000508756 ZNF557Q8N988 423 aaPredicted RBP3.84□□□□□ -1.79
CHD1-205ENST00000508756 CXorf40AQ8TE69 158 aa3.84□□□□□ -1.79
CHD1-205ENST00000508756 GEMIN6Q8WXD5 167 aaKnown RBP3.84□□□□□ -1.79
CHD1-205ENST00000508756 DEDD2Q8WXF8 326 aa3.84□□□□□ -1.79
CHD1-205ENST00000508756 CSPG4P5Q96PW8 444 aa3.84□□□□□ -1.79
CHD1-205ENST00000508756 NDFIP1Q9BT67 221 aa3.84□□□□□ -1.79
CHD1-205ENST00000508756 ZC4H2Q9NQZ6 224 aa3.84□□□□□ -1.79
CHD1-205ENST00000508756 EXD2Q9NVH0 621 aa3.84□□□□□ -1.79
CHD1-205ENST00000508756 ING4Q9UNL4 249 aa3.84□□□□□ -1.79
CHD1-205ENST00000508756 ZNF816-ZNF321PA0A0X1KG74 233 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 CIB4A0PJX0 185 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 RAB19A4D1S5 217 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 POLR1CO15160 346 aaPredicted RBP3.83□□□□□ -1.8
CHD1-205ENST00000508756 FARS2O95363 451 aaKnown RBP3.83□□□□□ -1.8
CHD1-205ENST00000508756 OXTP01178 125 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 APOA1P02647 267 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 CCL2P13500 99 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 PGAM1P18669 254 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 TCN1P20061 433 aaPredicted RBP3.83□□□□□ -1.8
CHD1-205ENST00000508756 GPR6P46095 362 aaPredicted RBP3.83□□□□□ -1.8
CHD1-205ENST00000508756 RORCP51449 518 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 CCNG1P51959 295 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 ZNF33AQ06730 810 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 TRAM2Q15035 370 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 IGFL1Q6UW32 110 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 C12orf54Q6X4T0 127 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 CMC1Q7Z7K0 106 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 PGAM4Q8N0Y7 254 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 ZNF615Q8N8J6 731 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 SDR42E1Q8WUS8 393 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 JSRP1Q96MG2 331 aaPredicted RBP3.83□□□□□ -1.8
CHD1-205ENST00000508756 SPIN2AQ99865 258 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 SPIN2BQ9BPZ2 258 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 LZTS2Q9BRK4 669 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 LLPHQ9BRT6 129 aaKnown RBP3.83□□□□□ -1.8
CHD1-205ENST00000508756 ZNF222Q9UK12 451 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 RCL1Q9Y2P8 373 aaKnown RBP3.83□□□□□ -1.8
CHD1-205ENST00000508756 GMEB1Q9Y692 573 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 MN1Q10571 1320 aaPredicted RBP3.83□□□□□ -1.8
CHD1-205ENST00000508756 MROH7Q68CQ1 1323 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 IGSF9BQ9UPX0 1349 aa3.83□□□□□ -1.8
CHD1-205ENST00000508756 GLYATL1P3A0A0U1RQE8 302 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 A0A1B0GVI7 797 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 ERICH2A1L162 156 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 B4GALT5O43286 388 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 GMDSO60547 372 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 NDUFS6O75380 124 aaKnown RBP3.82□□□□□ -1.8
CHD1-205ENST00000508756 HSBP1O75506 76 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 FGF1P05230 155 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 CD5P06127 495 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 CCNOP22674 350 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 AQP2P41181 271 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 CSNK1A1P48729 337 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 SERPINB8P50452 374 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 SUB1P53999 127 aaKnown RBP eCLIP3.82□□□□□ -1.8
CHD1-205ENST00000508756 SLC7A9P82251 487 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 RPEL1Q2QD12 228 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 STUMQ69YW2 141 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 PDPK2PQ6A1A2 396 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 RBM45Q8IUH3 476 aaKnown RBP3.82□□□□□ -1.8
CHD1-205ENST00000508756 SELENOHQ8IZQ5 122 aaKnown RBP3.82□□□□□ -1.8
CHD1-205ENST00000508756 OR5K2Q8NHB8 316 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 BAALCQ8WXS3 180 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 TFGQ92734 400 aaPredicted RBP3.82□□□□□ -1.8
CHD1-205ENST00000508756 COL21A1Q96P44 957 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 OPALINQ96PE5 141 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 SH3GL1Q99961 368 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 KCNS3Q9BQ31 491 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 KCNJ16Q9NPI9 418 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 ADA2Q9NZK5 511 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 CCDC59Q9P031 241 aaKnown RBP3.82□□□□□ -1.8
CHD1-205ENST00000508756 CTSFQ9UBX1 484 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 CD84Q9UIB8 345 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 POFUT2Q9Y2G5 429 aa3.82□□□□□ -1.8
CHD1-205ENST00000508756 MSH6P52701 1360 aa3.81□□□□□ -1.8
CHD1-205ENST00000508756 CEMIPQ8WUJ3 1361 aa3.81□□□□□ -1.8
CHD1-205ENST00000508756 MAP3K19Q56UN5 1328 aa3.81□□□□□ -1.8
CHD1-205ENST00000508756 A0A1W2PRD5 423 aa3.81□□□□□ -1.8
CHD1-205ENST00000508756 COLCA2A8K830 154 aa3.81□□□□□ -1.8
CHD1-205ENST00000508756 INS-IGF2F8WCM5 200 aa3.81□□□□□ -1.8
CHD1-205ENST00000508756 CLDN11O75508 207 aa3.81□□□□□ -1.8
CHD1-205ENST00000508756 ETHE1O95571 254 aa3.81□□□□□ -1.8
CHD1-205ENST00000508756 FGFR1OPO95684 399 aaKnown RBP3.81□□□□□ -1.8
CHD1-205ENST00000508756 SMIM10L1P0DMW3 83 aa3.81□□□□□ -1.8
CHD1-205ENST00000508756 RFC3P40938 356 aa3.81□□□□□ -1.8
CHD1-205ENST00000508756 RAB7AP51149 207 aa3.81□□□□□ -1.8
CHD1-205ENST00000508756 CLDN18P56856 261 aa3.81□□□□□ -1.8
CHD1-205ENST00000508756 RPS21P63220 83 aaKnown RBP3.81□□□□□ -1.8
CHD1-205ENST00000508756 SLC25A11Q02978 314 aaKnown RBP3.81□□□□□ -1.8
CHD1-205ENST00000508756 ANGPT1Q15389 498 aa3.81□□□□□ -1.8
CHD1-205ENST00000508756 SF3A2Q15428 464 aaKnown RBP3.81□□□□□ -1.8
CHD1-205ENST00000508756 VAX1Q5SQQ9 334 aa3.81□□□□□ -1.8
CHD1-205ENST00000508756 NANOGP8Q6NSW7 305 aa3.81□□□□□ -1.8
CHD1-205ENST00000508756 ERICH5Q6P6B1 374 aa3.81□□□□□ -1.8
CHD1-205ENST00000508756 CERS6Q6ZMG9 384 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms