RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SLC25A32Q9H2D1 315 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 TMEM138Q9NPI0 162 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 PPP4R1LQ9P1A2 415 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 WIF1Q9Y5W5 379 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 AHCTF1Q8WYP5 2266 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 A8MXK9 166 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 H3BML4 177 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 GOSR2O14653 212 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 OR2T1O43869 369 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 GPANK1O95872 356 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 HRGP04196 525 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 PTHLHP12272 177 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 HTR2CP28335 458 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 FOXK1P85037 733 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 ZMYND11Q15326 602 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 C4orf46Q504U0 113 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 PRAMEF20Q5VT98 475 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 OTPQ5XKR4 325 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 C11orf88Q6PI97 169 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 GABRG1Q8N1C3 465 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 MUC20Q8N307 709 aaPredicted RBP9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 KDM8Q8N371 416 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 C12orf45Q8N5I9 185 aaPredicted RBP9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 OR51S1Q8NGJ8 323 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 LHFPL5Q8TAF8 219 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 ST8SIA1Q92185 356 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 IMMP1LQ96LU5 166 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 ZNF700Q9H0M5 742 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 DNTTIP1Q9H147 329 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 PISDQ9UG56 409 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 FBXL2Q9UKC9 423 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 KCNMB2Q9Y691 235 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 CEP250Q9BV73 2442 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 TMEM272A0A1B0GTI8 110 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 B4E171 279 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 FTCDNL1E5RQL4 147 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 DXOO77932 396 aaKnown RBP9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 AHSA1O95433 338 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 RAB3DO95716 219 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 ISG15P05161 165 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 ITGA5P08648 1049 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 HOXD4P09016 255 aaPredicted RBP9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 UBBP0CG47 229 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 UBCP0CG48 685 aaKnown RBP9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 ZNF35P13682 527 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 HLA-DOBP13765 273 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 IGFBP3P17936 291 aaPredicted RBP9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 RAB6AP20340 208 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 PTGS2P35354 604 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 TSPAN7P41732 249 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 RPS27P42677 84 aaKnown RBP9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 H2BFSP57053 126 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 RPS27AP62979 156 aaKnown RBP9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 UBA52P62987 128 aaKnown RBP9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 INSM1Q01101 510 aaPredicted RBP9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 SRSF4Q08170 494 aaKnown RBP9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 MEF2DQ14814 521 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 ACKR1Q16570 336 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 TMEM225Q6GV28 225 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 RAB12Q6IQ22 244 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 DNM1P34Q6PK57 102 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 DEGS2Q6QHC5 323 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 ZNF704Q6ZNC4 412 aaPredicted RBP9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 CATSPERDQ86XM0 798 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 NKAIN3Q8N8D7 197 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 OR5M9Q8NGP3 310 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 OR5M1Q8NGP8 315 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 OR10AC1Q8NH08 325 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 ZNF519Q8TB69 540 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 STK35Q8TDR2 534 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 SLC25A28Q96A46 364 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 MFFQ9GZY8 342 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 ZNF160Q9HCG1 818 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 KCNG2Q9UJ96 466 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 CHCHD2Q9Y6H1 151 aaPredicted RBP9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 MED12Q93074 2177 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 SPTBN4Q9H254 2564 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 FXYD6-FXYD2A0A087WZ82 144 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 A0A1B0GTH9 108 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 A6NIZ1 184 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 PLPP3O14495 311 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 TPD52L2O43399 206 aaKnown RBP9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 EFNA2O43921 213 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 SCGNO76038 276 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 CD8AP01732 235 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 OPN1LWP04000 364 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 CD3DP04234 171 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 FGF2P09038 288 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 MGMTP16455 207 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 ACHEP22303 614 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 CD96P40200 585 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 FOLR3P41439 243 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 ZNF41P51814 821 aaPredicted RBP9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 SUMO3P55854 103 aaPredicted RBP9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 RAP1BP61224 184 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 RAP1AP62834 184 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 GLO1Q04760 184 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 MELKQ14680 651 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 OR7A5Q15622 319 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms