RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 RBMX2Q9Y388 322 aaKnown RBP2.84□□□□□ -1.95
TRAPPC13-209ENST00000508304 NEUROG3Q9Y4Z2 214 aa2.84□□□□□ -1.95
TRAPPC13-209ENST00000508304 GMEB1Q9Y692 573 aa2.84□□□□□ -1.95
TRAPPC13-209ENST00000508304 KCNE3Q9Y6H6 103 aa2.84□□□□□ -1.95
TRAPPC13-209ENST00000508304 RAI1Q7Z5J4 1906 aaPredicted RBP2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 GOLGA8QA0A0J9YX86 632 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 OR6C74A6NCV1 312 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 H7C2Y5 167 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 RRP8O43159 456 aaKnown RBP2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 PLEKHA8P1O95397 391 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 ACTL6AO96019 429 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 OR8U9P0C7N5 309 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 GFAPP14136 432 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 ELK1P19419 428 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 RAB4AP20338 218 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 ARL2P36404 184 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 CDKN2BP42772 138 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 P2RX1P51575 399 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 FGF8P55075 233 aaPredicted RBP2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 WNT4P56705 351 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 TAS2R60P59551 318 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 PAFAH1B2P68402 229 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 SLC35B1P78383 322 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 SLC39A6Q13433 755 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 DGCR6Q14129 220 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 GINS1Q14691 196 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 HERPUD1Q15011 391 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 GUCA2BQ16661 112 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 TTLL9Q3SXZ7 439 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 C9orf129Q5T035 196 aaKnown RBP2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 CASC10Q5T4H9 136 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 DEGS2Q6QHC5 323 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 WDR82Q6UXN9 313 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 NPSR1Q6W5P4 371 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 TMPRSS11AQ6ZMR5 421 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 COMTD1Q86VU5 262 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 LINC00469Q8N7U9 141 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 WDR31Q8NA23 367 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 C20orf203Q8NBC4 194 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 OR8U1Q8NH10 309 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 CDKL2Q92772 493 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 NRBF2Q96F24 287 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 ZNF285Q96NJ3 590 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 UTP23Q9BRU9 249 aaKnown RBP2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 COPS4Q9BT78 406 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 SLC25A2Q9BXI2 301 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 NDEL1Q9GZM8 345 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 CSNK1G1Q9HCP0 422 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 ZNF226Q9NYT6 803 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 TMEM9Q9P0T7 183 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 UVRAGQ9P2Y5 699 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 CD300AQ9UGN4 299 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 ZNF229Q9UJW7 825 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 GAKO14976 1311 aa2.83□□□□□ -1.96
TRAPPC13-209ENST00000508304 CHD4Q14839 1912 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 SEC14L6B5MCN3 397 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 ANKRD63C9JTQ0 380 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 GABRPO00591 440 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 EMC8O43402 210 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 BGLAPP02818 100 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 GNAO1P09471 354 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 IGHV3-43DP0DP04 118 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 ERGP11308 486 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 CCL2P13500 99 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 FUT3P21217 361 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 LCN1P31025 176 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 ANP32AP39687 249 aaKnown RBP2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 RANBP1P43487 201 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 ATP5J2P56134 94 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 ZNF121P58317 390 aaPredicted RBP2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 SLC7A9P82251 487 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 GPNMBQ14956 572 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 PON3Q15166 354 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 PIGGQ5H8A4 983 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 DUPD1Q68J44 220 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 NDUFAF7Q7L592 441 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 CAMK2N1Q7Z7J9 78 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 OR10J6PQ8NGY7 276 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 OR4S2Q8NH73 311 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 OR6X1Q8NH79 312 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 ACTRT1Q8TDG2 376 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 CCDC12Q8WUD4 166 aaPredicted RBP2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 PDCD6IPQ8WUM4 868 aaKnown RBP2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 NTAN1Q96AB6 310 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 CREB3L1Q96BA8 519 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 UQCC2Q9BRT2 126 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 HDHD3Q9BSH5 251 aaPredicted RBP2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 CHID1Q9BWS9 393 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 MAP1LC3CQ9BXW4 147 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 FRMD8P1Q9BZ68 369 aaPredicted RBP2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 NANOGQ9H9S0 305 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 EDA2RQ9HAV5 297 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 RPS6KB2Q9UBS0 482 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 TRAPPC4Q9Y296 219 aa2.82□□□□□ -1.96
TRAPPC13-209ENST00000508304 TDRD6O60522 2096 aaKnown RBP2.81□□□□□ -1.96
TRAPPC13-209ENST00000508304 A0A1B0GW15 77 aa2.81□□□□□ -1.96
TRAPPC13-209ENST00000508304 WI2-2373I1.2A0A1W2PRP0 233 aa2.81□□□□□ -1.96
TRAPPC13-209ENST00000508304 A6NDN8 102 aa2.81□□□□□ -1.96
TRAPPC13-209ENST00000508304 ANKRD65E5RJM6 399 aa2.81□□□□□ -1.96
TRAPPC13-209ENST00000508304 H0YHG0 523 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms