RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 RAB11FIP2Q7L804 512 aa12□□□□□ -0.49
SNCAIP-209ENST00000508017 OR2I1PQ8NGU4 316 aa12□□□□□ -0.49
SNCAIP-209ENST00000508017 MARCH1Q8TCQ1 289 aa12□□□□□ -0.49
SNCAIP-209ENST00000508017 TSLPQ969D9 159 aa12□□□□□ -0.49
SNCAIP-209ENST00000508017 RNF126Q9BV68 326 aa12□□□□□ -0.49
SNCAIP-209ENST00000508017 SLC7A5P2Q9GIP4 190 aa12□□□□□ -0.49
SNCAIP-209ENST00000508017 TXNIPQ9H3M7 391 aa12□□□□□ -0.49
SNCAIP-209ENST00000508017 CYTL1Q9NRR1 136 aa12□□□□□ -0.49
SNCAIP-209ENST00000508017 PHF3Q92576 2039 aaKnown RBP12□□□□□ -0.49
SNCAIP-209ENST00000508017 THADAQ6YHU6 1953 aa12□□□□□ -0.49
SNCAIP-209ENST00000508017 KIR2DS5A0A0G2JLQ3 304 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 A0A0G2JNG1 304 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 MEGF11A6BM72 1044 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 B4DGG1 531 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 F8VVB4 439 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 F8VWA3 439 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 H0YIZ8 118 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 KIR2DS3K7RE56 304 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 EIF1AYO14602 144 aaKnown RBP11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 CD79AP11912 226 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 RAB13P51153 203 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 B2MP61769 119 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 KIR2DS5Q14953 304 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 ZNF528Q3MIS6 628 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 DHRS7BQ6IAN0 325 aaPredicted RBP11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 FAM109BQ6ICB4 259 aaPredicted RBP11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 NUP54Q7Z3B4 507 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 RNF144BQ7Z419 303 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 DCXRQ7Z4W1 244 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 ZSCAN4Q8NAM6 433 aaPredicted RBP11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 OR52N4Q8NGI2 321 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 STOML3Q8TAV4 291 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 FGGYQ96C11 551 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 USB1Q9BQ65 265 aaKnown RBP11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 PTGES2Q9H7Z7 377 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 METTL21EPA6NDL7 271 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 MSGN1A6NI15 193 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 SOX1O00570 391 aaPredicted RBP11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 NUDT21O43809 227 aaKnown RBP11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 OR2T1O43869 369 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 SSX5O60225 188 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 TPT1P13693 172 aaKnown RBP11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 AKT2P31751 481 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 NKAPLQ5M9Q1 402 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 C10orf91Q5T1B1 145 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 PTCRAQ6ISU1 281 aaPredicted RBP11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 C2CD4CQ8TF44 421 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 ARL11Q969Q4 196 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 TREM1Q9NP99 234 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 TMEM100Q9NV29 134 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 COA4Q9NYJ1 87 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 RAB22AQ9UL26 194 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 FAM96BQ9Y3D0 163 aa11.99□□□□□ -0.49
SNCAIP-209ENST00000508017 TEX13DA0A0J9YY54 714 aaPredicted RBP11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 TMEM269A0A1B0GVZ9 245 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 DBX1A6NMT0 343 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 DUS4LO95620 317 aaKnown RBP11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 RAB6AP20340 208 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 MPZP25189 248 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 NFYBP25208 207 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 SLC6A8P48029 635 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 YPEL5P62699 121 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 MST1LQ2TV78 715 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 BAP18Q8IXM2 172 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 SLC30A7Q8NEW0 376 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 PTX4Q96A99 478 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 FOXQ1Q9C009 403 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 SLC5A6Q9Y289 635 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 CARHSP1Q9Y2V2 147 aaKnown RBP11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 PCDH15Q96QU1 1955 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 TMED7-TICAM2A0A0A6YYA0 188 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 IGKV1D-43A0A0B4J1Z2 117 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 PLPP3O14495 311 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 DXOO77932 396 aaKnown RBP11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 VSIG8P0DPA2 414 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 GP1BBP13224 206 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 RFC3P40938 356 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 DCDP81605 110 aaKnown RBP11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 GLO1Q04760 184 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 AIMP2Q13155 320 aaKnown RBP11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 TMEM92Q6UXU6 159 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 TMEM200AQ86VY9 491 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 ZFP82Q8N141 532 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 ST7LQ8TDW4 575 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 ADIPOR1Q96A54 375 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 CPNE2Q96FN4 548 aaPredicted RBP11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 CNTNAP3BQ96NU0 1288 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 CMSS1Q9BQ75 279 aaKnown RBP11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 NICN1Q9BSH3 213 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 CENPMQ9NSP4 180 aa11.98□□□□□ -0.49
SNCAIP-209ENST00000508017 BLACEA4D250 179 aa11.97□□□□□ -0.49
SNCAIP-209ENST00000508017 FRG2CA6NGY1 282 aa11.97□□□□□ -0.49
SNCAIP-209ENST00000508017 ADAP1O75689 374 aa11.97□□□□□ -0.49
SNCAIP-209ENST00000508017 ISG15P05161 165 aa11.97□□□□□ -0.49
SNCAIP-209ENST00000508017 FAM157CP0CG43 387 aa11.97□□□□□ -0.49
SNCAIP-209ENST00000508017 SPP1P10451 314 aa11.97□□□□□ -0.49
SNCAIP-209ENST00000508017 CD1CP29017 333 aa11.97□□□□□ -0.49
SNCAIP-209ENST00000508017 RORAP35398 523 aa11.97□□□□□ -0.49
SNCAIP-209ENST00000508017 GNALP38405 381 aa11.97□□□□□ -0.49
SNCAIP-209ENST00000508017 CBX5P45973 191 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms