RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 NRBF2Q96F24 287 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 TIMM17AQ99595 171 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 FOXC2Q99958 501 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 LZTS2Q9BRK4 669 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 SAMD10Q9BYL1 202 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 OR52D1Q9H346 318 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 SIRT7Q9NRC8 400 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 TUBG2Q9NRH3 451 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 DDX18Q9NVP1 670 aaKnown RBP1.99□□□□□ -2.09
LSM6-205ENST00000507449 MYEF2Q9P2K5 600 aaKnown RBP1.99□□□□□ -2.09
LSM6-205ENST00000507449 MYO10Q9HD67 2058 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 PALLDQ8WX93 1383 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 PCDH11XQ9BZA7 1347 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 SLIT3O75094 1523 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 IGKV2-28A0A075B6P5 120 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 A0A0J9YXV3 536 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 SUPT3HB4E1H0 165 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 GOLGA8TH3BQL2 631 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 M0R3G1 203 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 NME4O00746 187 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 PLPP1O14494 284 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 BCKDKO14874 412 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 RBFOX2O43251 390 aaKnown RBP eCLIP1.98□□□□□ -2.09
LSM6-205ENST00000507449 B4GALT5O43286 388 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 AKR7A2O43488 359 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 IGKV2D-28P01615 120 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 LINC00869P0C866 280 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 UBCP0CG48 685 aaKnown RBP1.98□□□□□ -2.09
LSM6-205ENST00000507449 PGA4P0DJD7 388 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 PGA3P0DJD8 388 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 MUC1P15941 1255 aaPredicted RBP1.98□□□□□ -2.09
LSM6-205ENST00000507449 GABRG2P18507 467 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 USF1P22415 310 aaPredicted RBP1.98□□□□□ -2.09
LSM6-205ENST00000507449 BMI1P35226 326 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 RFC3P40938 356 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 SERPINB8P50452 374 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 CDKN2DP55273 166 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 SYNJ2BPP57105 145 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 VSX2P58304 361 aaPredicted RBP1.98□□□□□ -2.09
LSM6-205ENST00000507449 RPS23P62266 143 aaKnown RBP1.98□□□□□ -2.09
LSM6-205ENST00000507449 ZNF266Q14584 549 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 C16orf72Q14CZ0 275 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 TRMT5Q32P41 509 aaKnown RBP1.98□□□□□ -2.09
LSM6-205ENST00000507449 CHRFAM7AQ494W8 412 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 SMUG1Q53HV7 270 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 C5orf47Q569G3 176 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 GCSAMLQ5JQS6 135 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 STUMQ69YW2 141 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 NANOGP8Q6NSW7 305 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 IGFL3Q6UXB1 125 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 SLC16A13Q7RTY0 426 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 FAM122BQ7Z309 247 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 PRSS58Q8IYP2 241 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 LRRC75AQ8NAA5 344 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 OR4K5Q8NGD3 323 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 OR5AR1Q8NGP9 310 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 OR2L8Q8NGY9 312 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 COQ8AQ8NI60 647 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 CIRBP-AS1Q8TBR5 109 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 RGP1Q92546 391 aaPredicted RBP1.98□□□□□ -2.09
LSM6-205ENST00000507449 PTX4Q96A99 478 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 RPEQ96AT9 228 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 DYNLL2Q96FJ2 89 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 NARS2Q96I59 477 aaKnown RBP1.98□□□□□ -2.09
LSM6-205ENST00000507449 ZNF488Q96MN9 340 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 UQCC2Q9BRT2 126 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 SLC17A7Q9P2U7 560 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 TRMT112Q9UI30 125 aaKnown RBP1.98□□□□□ -2.09
LSM6-205ENST00000507449 TMEM14AQ9Y6G1 99 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 COMMD3-BMI1R4GMX3 469 aa1.98□□□□□ -2.09
LSM6-205ENST00000507449 IGLV4-60A0A075B6I1 120 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 IGHV1OR15-9A0A0B4J2B8 117 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 TSPAN11A1L157 253 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 C5orf63A6NC05 138 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 OR6C74A6NCV1 312 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 NCF1BA6NI72 391 aaPredicted RBP1.97□□□□□ -2.09
LSM6-205ENST00000507449 LRRIQ4A6NIV6 560 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 COLCA2A8K830 154 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 NCF1CA8MVU1 366 aaPredicted RBP1.97□□□□□ -2.09
LSM6-205ENST00000507449 BPY2O14599 106 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 SIVA1O15304 175 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 ERI3O43414 337 aaKnown RBP1.97□□□□□ -2.09
LSM6-205ENST00000507449 FOXH1O75593 365 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 REM1O75628 298 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 CCNKO75909 580 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 FGFR1OPO95684 399 aaKnown RBP1.97□□□□□ -2.09
LSM6-205ENST00000507449 APCSP02743 223 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 OR8U9P0C7N5 309 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 PGA5P0DJD9 388 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 DTYMKP23919 212 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 PMELP40967 661 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 TNFSF9P41273 254 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 FABP6P51161 128 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 GFERP55789 205 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 CLDN8P56748 225 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 ZNF121P58317 390 aaPredicted RBP1.97□□□□□ -2.09
LSM6-205ENST00000507449 DGCR6Q14129 220 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 KIR2DS1Q14954 304 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 GABRA6Q16445 453 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms