RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 GGTLC2Q14390 218 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 LRRC36Q1X8D7 754 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 LCN1P1Q5VSP4 162 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 DNM1P46Q6ZS02 220 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 COLCA1Q6ZS62 124 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 SHFQ7M4L6 423 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 C1orf174Q8IYL3 243 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 OR8J1Q8NGP2 316 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 RNF133Q8WVZ7 376 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 Q96MF0 132 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 COPS4Q9BT78 406 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 C1QTNF5Q9BXJ0 243 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 TPK1Q9H3S4 243 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 CENPMQ9NSP4 180 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 DNAJC27Q9NZQ0 273 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 M0R135 149 aa15.54■□□□□ 0.08
NPHP4-210ENST00000506941 SSX4O60224 188 aa15.54■□□□□ 0.08
NPHP4-210ENST00000506941 NAT2P11245 290 aa15.54■□□□□ 0.08
NPHP4-210ENST00000506941 GCH1P30793 250 aa15.54■□□□□ 0.08
NPHP4-210ENST00000506941 EFNA4P52798 201 aa15.54■□□□□ 0.08
NPHP4-210ENST00000506941 NUDT6P53370 316 aa15.54■□□□□ 0.08
NPHP4-210ENST00000506941 HLXQ14774 488 aaPredicted RBP15.54■□□□□ 0.08
NPHP4-210ENST00000506941 SLC16A9Q7RTY1 509 aa15.54■□□□□ 0.08
NPHP4-210ENST00000506941 GID4Q8IVV7 300 aa15.54■□□□□ 0.08
NPHP4-210ENST00000506941 GALNT4Q8N4A0 578 aa15.54■□□□□ 0.08
NPHP4-210ENST00000506941 APOBEC3DQ96AK3 386 aaPredicted RBP15.54■□□□□ 0.08
NPHP4-210ENST00000506941 ZNF799Q96GE5 643 aa15.54■□□□□ 0.08
NPHP4-210ENST00000506941 ZNF582Q96NG8 517 aaPredicted RBP15.54■□□□□ 0.08
NPHP4-210ENST00000506941 BARX1Q9HBU1 254 aaPredicted RBP15.54■□□□□ 0.08
NPHP4-210ENST00000506941 PTTG3PQ9NZH4 202 aa15.54■□□□□ 0.08
NPHP4-210ENST00000506941 NKX1-2Q9UD57 310 aaPredicted RBP15.54■□□□□ 0.08
NPHP4-210ENST00000506941 FBXO9Q9UK97 447 aaPredicted RBP15.54■□□□□ 0.08
NPHP4-210ENST00000506941 C5orf63A6NC05 138 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 SLC22A31A6NKX4 558 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 J3QW42 95 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 F12P00748 615 aaPredicted RBP15.53■□□□□ 0.08
NPHP4-210ENST00000506941 LYNP07948 512 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 OPRL1P41146 370 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 TPTEP56180 551 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 SELENOVP59797 346 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 PSG7Q13046 419 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 NKPD1Q17RQ9 610 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 CLEC12BQ2HXU8 276 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 ZNF525Q8N782 197 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 ZNF454Q8N9F8 522 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 SPTSSAQ969W0 71 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 CNN2Q99439 309 aaKnown RBP15.53■□□□□ 0.08
NPHP4-210ENST00000506941 KCNJ15Q99712 375 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 YIPF3Q9GZM5 350 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 ADGRL4Q9HBW9 690 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 FAM118AQ9NWS6 357 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 IMPAD1Q9NX62 359 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 SLCO1C1Q9NYB5 712 aa15.53■□□□□ 0.08
NPHP4-210ENST00000506941 H2AFY2Q9P0M6 372 aaPredicted RBP15.53■□□□□ 0.08
NPHP4-210ENST00000506941 TRIM64A6NGJ6 449 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 TRIM64BA6NI03 449 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 PRR32B1ATL7 298 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 CASQ2O14958 399 aaPredicted RBP15.52■□□□□ 0.08
NPHP4-210ENST00000506941 LCATP04180 440 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 ALOX5APP20292 161 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 TUBG1P23258 451 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 SLC6A9P48067 706 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 MMP15P51511 669 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 PRKXP51817 358 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 TAF13Q15543 124 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 SNAI3Q3KNW1 292 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 OGFRL1Q5TC84 451 aaPredicted RBP15.52■□□□□ 0.08
NPHP4-210ENST00000506941 FBXW12Q6X9E4 464 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 RFLNBQ8N5W9 214 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 THEM6Q8WUY1 208 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 CMBLQ96DG6 245 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 RAB1BQ9H0U4 201 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 DCLRE1BQ9H816 532 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 TUBG2Q9NRH3 451 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 SMPD3Q9NY59 655 aaPredicted RBP15.52■□□□□ 0.08
NPHP4-210ENST00000506941 AASSQ9UDR5 926 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 COPS3Q9UNS2 423 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 GMPPBQ9Y5P6 360 aa15.52■□□□□ 0.08
NPHP4-210ENST00000506941 DYSFO75923 2080 aa15.52■□□□□ 0.07
NPHP4-210ENST00000506941 LOC100130705A0A1B0GUX0 176 aa15.51■□□□□ 0.07
NPHP4-210ENST00000506941 NCR1O76036 304 aa15.51■□□□□ 0.07
NPHP4-210ENST00000506941 SLC2A1P11166 492 aa15.51■□□□□ 0.07
NPHP4-210ENST00000506941 HTR1FP30939 366 aa15.51■□□□□ 0.07
NPHP4-210ENST00000506941 PRSS12P56730 875 aa15.51■□□□□ 0.07
NPHP4-210ENST00000506941 SNRPGP62308 76 aaKnown RBP15.51■□□□□ 0.07
NPHP4-210ENST00000506941 GRB2P62993 217 aaKnown RBP15.51■□□□□ 0.07
NPHP4-210ENST00000506941 DRAM2Q6UX65 266 aa15.51■□□□□ 0.07
NPHP4-210ENST00000506941 RHOUQ7L0Q8 258 aa15.51■□□□□ 0.07
NPHP4-210ENST00000506941 OR5L1Q8NGL2 311 aa15.51■□□□□ 0.07
NPHP4-210ENST00000506941 TRUB1Q8WWH5 349 aaKnown RBP15.51■□□□□ 0.07
NPHP4-210ENST00000506941 HAVCR1Q96D42 359 aa15.51■□□□□ 0.07
NPHP4-210ENST00000506941 COG8Q96MW5 612 aa15.51■□□□□ 0.07
NPHP4-210ENST00000506941 RDH12Q96NR8 316 aa15.51■□□□□ 0.07
NPHP4-210ENST00000506941 TMUB1Q9BVT8 246 aa15.51■□□□□ 0.07
NPHP4-210ENST00000506941 TTTY10Q9BZA0 68 aa15.51■□□□□ 0.07
NPHP4-210ENST00000506941 MS4A5Q9H3V2 200 aa15.51■□□□□ 0.07
NPHP4-210ENST00000506941 HAO2Q9NYQ3 351 aa15.51■□□□□ 0.07
NPHP4-210ENST00000506941 WARS2Q9UGM6 360 aaKnown RBP15.51■□□□□ 0.07
NPHP4-210ENST00000506941 LAMP5Q9UJQ1 280 aa15.51■□□□□ 0.07
NPHP4-210ENST00000506941 PURGQ9UJV8 347 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms