RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 ZNF107Q9UII5 783 aaPredicted RBP3.94□□□□□ -1.78
CLDND1-212ENST00000506885 ASF1AQ9Y294 204 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 STYXL1Q9Y6J8 313 aa3.94□□□□□ -1.78
CLDND1-212ENST00000506885 RIMS1Q86UR5 1692 aaKnown RBP3.94□□□□□ -1.78
CLDND1-212ENST00000506885 BCORL1Q5H9F3 1711 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 RBMY1BA6NDE4 496 aaKnown RBP3.93□□□□□ -1.78
CLDND1-212ENST00000506885 RBMY1EA6NEQ0 496 aaKnown RBP3.93□□□□□ -1.78
CLDND1-212ENST00000506885 TMEM114B3SHH9 223 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 ERVV-1B6SEH8 477 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 ERVV-2B6SEH9 535 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 FTCDNL1E5RQL4 147 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 J3QLI3 93 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 PDHXO00330 501 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 SLC16A7O60669 478 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 DPM1O60762 260 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 MPZL1O95297 269 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 PPP1R3DO95685 299 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 SNAP29O95721 258 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 RAB36O95755 333 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 HPRT1P00492 218 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 RPS17P08708 135 aaKnown RBP3.93□□□□□ -1.78
CLDND1-212ENST00000506885 CD48P09326 243 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 RBMY1DP0C7P1 496 aaKnown RBP3.93□□□□□ -1.78
CLDND1-212ENST00000506885 RBMY1A1P0DJD3 496 aaKnown RBP3.93□□□□□ -1.78
CLDND1-212ENST00000506885 GABRG2P18507 467 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 ZP3P21754 424 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 HSD11B1P28845 292 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 SHC1P29353 583 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 ARL2P36404 184 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 GPX4P36969 197 aaPredicted RBP3.93□□□□□ -1.78
CLDND1-212ENST00000506885 KIR2DS2P43631 304 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 GPR6P46095 362 aaPredicted RBP3.93□□□□□ -1.78
CLDND1-212ENST00000506885 FABP6P51161 128 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 RIDAP52758 137 aaKnown RBP3.93□□□□□ -1.78
CLDND1-212ENST00000506885 NDUFV3P56181 108 aaKnown RBP3.93□□□□□ -1.78
CLDND1-212ENST00000506885 OR10A3P58181 314 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 SEMG2Q02383 582 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 MGAT3Q09327 533 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 TWF1Q12792 350 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 TSPAN31Q12999 210 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 SLC10A1Q14973 349 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 ZNF146Q15072 292 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 GUSBP1Q15486 140 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 MICAQ29983 383 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 C17orf58Q2M2W7 97 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 OR10J3Q5JRS4 329 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 FHL5Q5TD97 284 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 C9orf57Q5W0N0 161 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 MBOAT2Q6ZWT7 520 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 NUP37Q8NFH4 326 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 ZNF519Q8TB69 540 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 DYNC2LI1Q8TCX1 351 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 TAF15Q92804 592 aaKnown RBP eCLIP3.93□□□□□ -1.78
CLDND1-212ENST00000506885 NEUROG1Q92886 237 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 FGF14Q92915 247 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 OPTNQ96CV9 577 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 PIK3IP1Q96FE7 263 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 MED30Q96HR3 178 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 ZNF488Q96MN9 340 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 MBOAT7Q96N66 472 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 MEIS3Q99687 375 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 RNF126Q9BV68 326 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 DSN1Q9H410 356 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 DDX31Q9H8H2 851 aaKnown RBP3.93□□□□□ -1.78
CLDND1-212ENST00000506885 REEP1Q9H902 201 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 RDH14Q9HBH5 336 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 HRASLSQ9HDD0 168 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 ACOT13Q9NPJ3 140 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 BABAM2Q9NXR7 383 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 CES1P1Q9UKY3 287 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 RAB23Q9ULC3 237 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 KLF12Q9Y4X4 402 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 V9GY05 133 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 CFAP43Q8NDM7 1665 aa3.93□□□□□ -1.78
CLDND1-212ENST00000506885 MED1Q15648 1581 aaPredicted RBP3.93□□□□□ -1.78
CLDND1-212ENST00000506885 MSH6P52701 1360 aa3.92□□□□□ -1.78
CLDND1-212ENST00000506885 ARAP3Q8WWN8 1544 aa3.92□□□□□ -1.78
CLDND1-212ENST00000506885 KDM5BQ9UGL1 1544 aa3.92□□□□□ -1.78
CLDND1-212ENST00000506885 KIR2DS1A0A191URI9 304 aa3.92□□□□□ -1.78
CLDND1-212ENST00000506885 A6NDN8 102 aa3.92□□□□□ -1.78
CLDND1-212ENST00000506885 NCBP2LA6PVI3 153 aaKnown RBP3.92□□□□□ -1.78
CLDND1-212ENST00000506885 ANKRD65E5RJM6 399 aa3.92□□□□□ -1.78
CLDND1-212ENST00000506885 SLCO1B7G3V0H7 640 aa3.92□□□□□ -1.78
CLDND1-212ENST00000506885 H0Y980 276 aa3.92□□□□□ -1.78
CLDND1-212ENST00000506885 FGF16O43320 207 aa3.92□□□□□ -1.78
CLDND1-212ENST00000506885 MPZL2O60487 215 aa3.92□□□□□ -1.78
CLDND1-212ENST00000506885 HPGDSO60760 199 aa3.92□□□□□ -1.78
CLDND1-212ENST00000506885 SHOX2O60902 331 aaPredicted RBP3.92□□□□□ -1.78
CLDND1-212ENST00000506885 NQO1P15559 274 aaKnown RBP3.92□□□□□ -1.78
CLDND1-212ENST00000506885 USF1P22415 310 aaPredicted RBP3.92□□□□□ -1.78
CLDND1-212ENST00000506885 SERPINB9P50453 376 aa3.92□□□□□ -1.78
CLDND1-212ENST00000506885 DSCR9P59020 149 aa3.92□□□□□ -1.78
CLDND1-212ENST00000506885 ERVPABLB-1P60509 514 aa3.92□□□□□ -1.78
CLDND1-212ENST00000506885 RHOAP61586 193 aa3.92□□□□□ -1.78
CLDND1-212ENST00000506885 ACVR1Q04771 509 aa3.92□□□□□ -1.78
CLDND1-212ENST00000506885 CKAP4Q07065 602 aaKnown RBP3.92□□□□□ -1.78
CLDND1-212ENST00000506885 ELAVL2Q12926 359 aaKnown RBP3.92□□□□□ -1.78
CLDND1-212ENST00000506885 KIR2DS1Q14954 304 aa3.92□□□□□ -1.78
CLDND1-212ENST00000506885 SIX1Q15475 284 aaPredicted RBP3.92□□□□□ -1.78
CLDND1-212ENST00000506885 PDZD11Q5EBL8 140 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms