RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 OTX1P32242 354 aaPredicted RBP1.38□□□□□ -2.19
GYPB-207ENST00000506679 VSX2P58304 361 aaPredicted RBP1.38□□□□□ -2.19
GYPB-207ENST00000506679 TAS2R31P59538 309 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 SELENBP1Q13228 472 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 SRSF5Q13243 272 aaKnown RBP1.38□□□□□ -2.19
GYPB-207ENST00000506679 CUL2Q13617 745 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 RCN1Q15293 331 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 MRPL23Q16540 153 aaKnown RBP1.38□□□□□ -2.19
GYPB-207ENST00000506679 SNRNP35Q16560 246 aaKnown RBP1.38□□□□□ -2.19
GYPB-207ENST00000506679 MPV17L2Q567V2 206 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 TCEAL5Q5H9L2 206 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 CARD17Q5XLA6 110 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 C22orf42Q6IC83 251 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 MBOAT1Q6ZNC8 495 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 CENPQQ7L2Z9 268 aaPredicted RBP1.38□□□□□ -2.19
GYPB-207ENST00000506679 SLC16A14Q7RTX9 510 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 SNX20Q7Z614 316 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 CBLN2Q8IUK8 224 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 LINC00304Q8N9R0 145 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 CHST4Q8NCG5 386 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 OR52E2Q8NGJ4 325 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 OR52K2Q8NGK3 314 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 OR4A4PQ8NGN8 299 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 OR9A2Q8NGT5 310 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 NUBPLQ8TB37 319 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 TCEAL3Q969E4 200 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 SLC38A4Q969I6 547 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 CHP1Q99653 195 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 HSD17B10Q99714 261 aaKnown RBP1.38□□□□□ -2.19
GYPB-207ENST00000506679 CENPKQ9BS16 269 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 TEKT3Q9BXF9 490 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 FAM192AQ9GZU8 254 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 EDA2RQ9HAV5 297 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 EXOSC4Q9NPD3 245 aaKnown RBP1.38□□□□□ -2.19
GYPB-207ENST00000506679 CCDC59Q9P031 241 aaKnown RBP1.38□□□□□ -2.19
GYPB-207ENST00000506679 TRMT112Q9UI30 125 aaKnown RBP1.38□□□□□ -2.19
GYPB-207ENST00000506679 SCN4AP35499 1836 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 TRIP11Q15643 1979 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 NSD2O96028 1365 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.37□□□□□ -2.19
GYPB-207ENST00000506679 SDK2Q58EX2 2172 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 A0A075B6Q4 140 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 A0A0J9YXV3 536 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 A6NDN8 102 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 CHST10O43529 356 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 RNF13O43567 381 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 SLC22A5O76082 557 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 GLSO94925 669 aaPredicted RBP1.37□□□□□ -2.19
GYPB-207ENST00000506679 IGLV3-25P01717 112 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 IGHV3-11P01762 117 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 HLA-DQB1P01920 261 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 IL1RNP18510 177 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 EIF2S2P20042 333 aaKnown RBP1.37□□□□□ -2.19
GYPB-207ENST00000506679 ME2P23368 584 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 COL8A2P25067 703 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 RRM2P31350 389 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 CRISP1P54107 249 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 CDKN2DP55273 166 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 RGS8P57771 180 aaPredicted RBP1.37□□□□□ -2.19
GYPB-207ENST00000506679 BEX3Q00994 111 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 SLC39A6Q13433 755 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 PIGHQ14442 188 aaPredicted RBP1.37□□□□□ -2.19
GYPB-207ENST00000506679 SPANXN2Q5MJ10 180 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 C1orf185Q5T7R7 199 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 FAM222AQ5U5X8 452 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 PRAMEF20Q5VT98 475 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 ADNP2Q6IQ32 1131 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 H3F3CQ6NXT2 135 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 MBOAT2Q6ZWT7 520 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 CMTM1Q8IZ96 169 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 TMEM256Q8N2U0 113 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 OR13G1Q8NGZ3 307 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 TSEN15Q8WW01 171 aaKnown RBP1.37□□□□□ -2.19
GYPB-207ENST00000506679 CAPSLQ8WWF8 208 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 TGS1Q96RS0 853 aaKnown RBP1.37□□□□□ -2.19
GYPB-207ENST00000506679 RBBP8Q99708 897 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 TBL1YQ9BQ87 522 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 GGTLC1Q9BX51 225 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 ANKRA2Q9H9E1 313 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 NEK6Q9HC98 313 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 FBXO6Q9NRD1 293 aaPredicted RBP1.37□□□□□ -2.19
GYPB-207ENST00000506679 SAMSN1Q9NSI8 373 aaKnown RBP1.37□□□□□ -2.19
GYPB-207ENST00000506679 CBY1Q9Y3M2 126 aa1.37□□□□□ -2.19
GYPB-207ENST00000506679 FBN1P35555 2871 aaKnown RBP1.37□□□□□ -2.19
GYPB-207ENST00000506679 PDZK1P1A8MUH7 402 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 VGLL3A8MV65 326 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 NVLO15381 856 aaKnown RBP1.36□□□□□ -2.19
GYPB-207ENST00000506679 RDH16O75452 317 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 FLOT1O75955 427 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 FTH1P02794 183 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 PABPC4LP0CB38 370 aaKnown RBP1.36□□□□□ -2.19
GYPB-207ENST00000506679 SFTPCP11686 197 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 SYKP43405 635 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 C21orf59P57076 290 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 RPS23P62266 143 aaKnown RBP1.36□□□□□ -2.19
GYPB-207ENST00000506679 RPL23P62829 140 aaKnown RBP1.36□□□□□ -2.19
GYPB-207ENST00000506679 SEMG2Q02383 582 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 IFT88Q13099 833 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 TRAM2Q15035 370 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 FHOD3Q2V2M9 1422 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms