RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 KCNG2Q9UJ96 466 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 PRPF19Q9UMS4 504 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 DYSFO75923 2080 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 DYNC1I1O14576 645 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 ACOT8O14734 319 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 PLPP2O43688 288 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 CCNB2O95067 398 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 IGHV2-70P01814 119 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 ACSM4P0C7M7 580 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 ANPEPP15144 967 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 CENPAP49450 140 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 PPP1R8Q12972 351 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 ECH1Q13011 328 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 HNRNPA0Q13151 305 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 HLXQ14774 488 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 MICAQ29983 383 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 CLEC12AQ5QGZ9 265 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 OR2T5Q6IEZ7 315 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 ACSM5Q6NUN0 579 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 LINC00346Q8IVM7 164 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 LNX2Q8N448 690 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 RFLNBQ8N5W9 214 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 ZNF283Q8N7M2 679 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 CYB561A3Q8NBI2 242 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 AQP11Q8NBQ7 271 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 OR8G5Q8NG78 346 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 OR2Z1Q8NG97 314 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 OR52L1Q8NGH7 329 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 OR5L1Q8NGL2 311 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 OR10S1Q8NGN2 331 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 OR2T29Q8NH02 315 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 ZNRF4Q8WWF5 429 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 ASB9Q96DX5 294 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 MAP6Q96JE9 813 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 SIGLEC11Q96RL6 698 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 NMNAT2Q9BZQ4 307 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 TMEM106BQ9NUM4 274 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 FAM53CQ9NYF3 392 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 NPTNQ9Y639 398 aa7.66□□□□□ -1.18
PDLIM5-209ENST00000506632 IQCF6A8MYZ5 107 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 SURF4O15260 269 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 PNPP00491 289 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 AVPP01185 164 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 RPLP1P05386 114 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 RAP2AP10114 183 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 PSKH1P11801 424 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 TNFRSF1AP19438 455 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 TNFSF4P23510 183 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 OTX1P32242 354 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 PYCR1P32322 319 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 SRP14P37108 136 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 RBMXP38159 391 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 SRSF2Q01130 221 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 GK3PQ14409 553 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 PCK2Q16822 640 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 TMEM155Q4W5P6 130 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 FAM98BQ52LJ0 330 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 OR2T2Q6IF00 324 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 CD300LDQ6UXZ3 194 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 ADGRG5Q8IZF4 528 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 OR5AS1Q8N127 324 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 SLC37A3Q8NCC5 494 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 OR2AJ1Q8NGZ0 328 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 OR4Q3Q8NH05 313 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 ITLN1Q8WWA0 313 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 KCTD12Q96CX2 325 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 CLPTM1LQ96KA5 538 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 OR2V2Q96R30 315 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 PITX2Q99697 317 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 ATF6BQ99941 703 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 GAL3ST1Q99999 423 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 SLC30A2Q9BRI3 323 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 RBM4Q9BWF3 364 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 TSSK6Q9BXA6 273 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 TMPRSS13Q9BYE2 586 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 DDX28Q9NUL7 540 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 TBC1D23Q9NUY8 699 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 PTTG3PQ9NZH4 202 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 POLR3KQ9Y2Y1 108 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 SAMHD1Q9Y3Z3 626 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 COMMD3-BMI1R4GMX3 469 aa7.65□□□□□ -1.18
PDLIM5-209ENST00000506632 ARHGAP32A7KAX9 2087 aa7.64□□□□□ -1.19
PDLIM5-209ENST00000506632 PPIAL4EA0A075B759 164 aa7.64□□□□□ -1.19
PDLIM5-209ENST00000506632 PPIAL4CA0A0B4J2A2 164 aa7.64□□□□□ -1.19
PDLIM5-209ENST00000506632 ARRDC5A6NEK1 342 aa7.64□□□□□ -1.19
PDLIM5-209ENST00000506632 F5H0A9 414 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-209ENST00000506632 PPIAL4DF5H284 164 aa7.64□□□□□ -1.19
PDLIM5-209ENST00000506632 MLNRO43193 412 aa7.64□□□□□ -1.19
PDLIM5-209ENST00000506632 HLA-DQA2P01906 255 aa7.64□□□□□ -1.19
PDLIM5-209ENST00000506632 PPIAL4FP0DN26 164 aa7.64□□□□□ -1.19
PDLIM5-209ENST00000506632 ATF4P18848 351 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-209ENST00000506632 ANOS1P23352 680 aa7.64□□□□□ -1.19
PDLIM5-209ENST00000506632 RPS27P42677 84 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-209ENST00000506632 SLC25A1P53007 311 aa7.64□□□□□ -1.19
PDLIM5-209ENST00000506632 TRAP1Q12931 704 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-209ENST00000506632 CRMP1Q14194 572 aa7.64□□□□□ -1.19
PDLIM5-209ENST00000506632 GK2Q14410 553 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-209ENST00000506632 SLC27A4Q6P1M0 643 aa7.64□□□□□ -1.19
PDLIM5-209ENST00000506632 FAHD2BQ6P2I3 314 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms