RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 OR51M1Q9H341 326 aa2.35□□□□□ -2.03
TRAPPC11-205ENST00000506426 GPATCH2LQ9NWQ4 482 aa2.35□□□□□ -2.03
TRAPPC11-205ENST00000506426 QPCTLQ9NXS2 382 aa2.35□□□□□ -2.03
TRAPPC11-205ENST00000506426 PDP1Q9P0J1 537 aaPredicted RBP2.35□□□□□ -2.03
TRAPPC11-205ENST00000506426 TMEM9Q9P0T7 183 aa2.35□□□□□ -2.03
TRAPPC11-205ENST00000506426 TBC1D24Q9ULP9 559 aa2.35□□□□□ -2.03
TRAPPC11-205ENST00000506426 PTPRJQ12913 1337 aa2.35□□□□□ -2.03
TRAPPC11-205ENST00000506426 DOCK8Q8NF50 2099 aa2.35□□□□□ -2.03
TRAPPC11-205ENST00000506426 CNOT1A5YKK6 2376 aaKnown RBP2.35□□□□□ -2.03
TRAPPC11-205ENST00000506426 FAM208BQ5VWN6 2430 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 VWA8A3KMH1 1905 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 ITPR1Q14643 2758 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 AKAP13Q12802 2813 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 PATJQ8NI35 1801 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 TRAV25A0A0B4J276 109 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 A0A0J9YXY3 114 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 SPAARA0A1B0GVQ0 90 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 MYBPHLA2RUH7 354 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 GOLGA8IPA6NC78 632 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 ZFP92A6NM28 416 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 GOLGA8JA6NMD2 632 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 C12orf77C9JDV5 145 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 NDUFAB1O14561 156 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 EIF3HO15372 352 aaKnown RBP eCLIP2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 HUS1O60921 280 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 EIF3GO75821 320 aaKnown RBP eCLIP2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 FGFR1OPO95684 399 aaKnown RBP2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 CLIC3O95833 236 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 TSPAN13O95857 204 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 CLTAP09496 248 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 HPGDP15428 266 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 HMGA1P17096 107 aaKnown RBP2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 GSTM3P21266 225 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 RORAP35398 523 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 GPR6P46095 362 aaPredicted RBP2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 NPBWR2P48146 333 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 SSR4P51571 173 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 ADARB1P78563 741 aaKnown RBP2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 TFAMQ00059 246 aaKnown RBP2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 KDSRQ06136 332 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 MAB21L1Q13394 359 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 DOC2AQ14183 400 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 DMC1Q14565 340 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 CYTH1Q15438 398 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 NSDHLQ15738 373 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 KLHL40Q2TBA0 621 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 PIP5KL1Q5T9C9 394 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 TTC19Q6DKK2 380 aaPredicted RBP2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 FAM173BQ6P4H8 233 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 TTC23LQ6PF05 361 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 CNIH2Q6PI25 160 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 ZNF620Q6ZNG0 422 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 Q6ZR54 194 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 PEX26Q7Z412 305 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 MMAAQ8IVH4 418 aaKnown RBP2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 IQCKQ8N0W5 287 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 PUSL1Q8N0Z8 303 aaKnown RBP2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 PDIK1LQ8N165 341 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 DEFB119Q8N690 84 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 PQLC3Q8N755 202 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 FBXL13Q8NEE6 735 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 DEFB124Q8NES8 71 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 TSTD1Q8NFU3 115 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 UCN3Q969E3 161 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 SGK3Q96BR1 496 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 C16orf74Q96GX8 76 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 RARRES2Q99969 163 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 PYGO2Q9BRQ0 406 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 TMEM246Q9BRR3 403 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 CLSTN2Q9H4D0 955 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 ELOVL6Q9H5J4 265 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 SIAEQ9HAT2 523 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 FANCEQ9HB96 536 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 FGF20Q9NP95 211 aaPredicted RBP2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 CCNB1IP1Q9NPC3 277 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 RPS10P5Q9NQ39 176 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 SLC7A10Q9NS82 523 aa2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 LSM7Q9UK45 103 aaKnown RBP2.34□□□□□ -2.03
TRAPPC11-205ENST00000506426 FASNP49327 2511 aaKnown RBP2.34□□□□□ -2.04
TRAPPC11-205ENST00000506426 AGRNO00468 2067 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 CACNA1EQ15878 2313 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 VPS37CA5D8V6 355 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 E7ENQ6 273 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 CDC7O00311 574 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 PIRO00625 290 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 MRPS12O15235 138 aaKnown RBP2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 AKR7A2O43488 359 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 EEDO75530 441 aaKnown RBP2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 MMP23AO75900 390 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 ALDOBP05062 364 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 MRPL19P49406 292 aaKnown RBP2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 CSNK1EP49674 416 aaKnown RBP2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 TAF6P49848 677 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 SUB1P53999 127 aaKnown RBP eCLIP2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 DSCR10P59022 87 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 PAX5Q02548 391 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 ACVR1Q04771 509 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 ECH1Q13011 328 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 ORC2Q13416 577 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZBTB6Q15916 424 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms