RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 ACTG1P63261 375 aa15.27■□□□□ 0.04
TRAPPC11-204ENST00000505676 MAB21L1Q13394 359 aa15.27■□□□□ 0.04
TRAPPC11-204ENST00000505676 STK11Q15831 433 aa15.27■□□□□ 0.04
TRAPPC11-204ENST00000505676 CSRP2Q16527 193 aa15.27■□□□□ 0.04
TRAPPC11-204ENST00000505676 DHRS13Q6UX07 377 aa15.27■□□□□ 0.04
TRAPPC11-204ENST00000505676 FGD2Q7Z6J4 655 aa15.27■□□□□ 0.04
TRAPPC11-204ENST00000505676 PIP4P1Q86T03 277 aa15.27■□□□□ 0.04
TRAPPC11-204ENST00000505676 YRDCQ86U90 279 aaKnown RBP15.27■□□□□ 0.04
TRAPPC11-204ENST00000505676 ZIC4Q8N9L1 334 aa15.27■□□□□ 0.04
TRAPPC11-204ENST00000505676 PLPP7Q8NBV4 271 aa15.27■□□□□ 0.04
TRAPPC11-204ENST00000505676 OR1M1Q8NGA1 313 aa15.27■□□□□ 0.04
TRAPPC11-204ENST00000505676 ZNF385AQ96PM9 386 aaKnown RBP15.27■□□□□ 0.04
TRAPPC11-204ENST00000505676 SRXN1Q9BYN0 137 aa15.27■□□□□ 0.04
TRAPPC11-204ENST00000505676 PAQR5Q9NXK6 330 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC11-204ENST00000505676 N6AMT1Q9Y5N5 214 aa15.27■□□□□ 0.04
TRAPPC11-204ENST00000505676 CIB4A0PJX0 185 aa15.27■□□□□ 0.03
TRAPPC11-204ENST00000505676 BPNT1O95861 308 aa15.27■□□□□ 0.03
TRAPPC11-204ENST00000505676 HPNP05981 417 aa15.27■□□□□ 0.03
TRAPPC11-204ENST00000505676 CX3CR1P49238 355 aa15.27■□□□□ 0.03
TRAPPC11-204ENST00000505676 GSK3AP49840 483 aa15.27■□□□□ 0.03
TRAPPC11-204ENST00000505676 GFRA1P56159 465 aa15.27■□□□□ 0.03
TRAPPC11-204ENST00000505676 FOXO1Q12778 655 aa15.27■□□□□ 0.03
TRAPPC11-204ENST00000505676 ECH1Q13011 328 aa15.27■□□□□ 0.03
TRAPPC11-204ENST00000505676 TRIP6Q15654 476 aaKnown RBP15.27■□□□□ 0.03
TRAPPC11-204ENST00000505676 SGCAQ16586 387 aa15.27■□□□□ 0.03
TRAPPC11-204ENST00000505676 FAM27BQ5VT28 67 aa15.27■□□□□ 0.03
TRAPPC11-204ENST00000505676 CD276Q5ZPR3 534 aa15.27■□□□□ 0.03
TRAPPC11-204ENST00000505676 ZNF813Q6ZN06 617 aa15.27■□□□□ 0.03
TRAPPC11-204ENST00000505676 GLCCI1Q86VQ1 547 aa15.27■□□□□ 0.03
TRAPPC11-204ENST00000505676 CPT1CQ8TCG5 803 aa15.27■□□□□ 0.03
TRAPPC11-204ENST00000505676 UCN2Q96RP3 112 aa15.27■□□□□ 0.03
TRAPPC11-204ENST00000505676 ZNF416Q9BWM5 594 aa15.27■□□□□ 0.03
TRAPPC11-204ENST00000505676 RAB22AQ9UL26 194 aa15.27■□□□□ 0.03
TRAPPC11-204ENST00000505676 LAMA1P25391 3075 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 A0A0G2JMM0 328 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 A0A0U1RQV5 110 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 A0A1W2PPB8 328 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 A0A1W2PRS3 328 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 METTL21EPA6NDL7 271 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 KIR3DP1A8MWS1 328 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 WDPCPO95876 746 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 PSMB1P20618 241 aaKnown RBP15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 STOMP27105 288 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 ERP29P30040 261 aaKnown RBP15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 PRSS3P35030 304 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 CD96P40200 585 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 ZNF121P58317 390 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 JAGN1Q8N5M9 183 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 ZNF283Q8N7M2 679 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 CLEC1AQ8NC01 280 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 OR2M7Q8NG81 312 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 NABP1Q96AH0 204 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 TMEM45BQ96B21 275 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 FGGYQ96C11 551 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 MED28Q9H204 178 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 SLC5A6Q9Y289 635 aa15.26■□□□□ 0.03
TRAPPC11-204ENST00000505676 A0A1B0GTI1 187 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 LOC101059948A0A1B0GTJ6 334 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 RER1O15258 196 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 TRAPPC6AO75865 159 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 ALDOBP05062 364 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 ENDOGQ14249 297 aaKnown RBP15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 NRN1LQ496H8 165 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 RNASE12Q5GAN4 147 aaKnown RBP15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 SLC25A25Q6KCM7 469 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 NOXA1Q86UR1 476 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 GPR137CQ8N3F9 429 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 SUMF1Q8NBK3 374 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 ATG5Q9H1Y0 275 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 GHITMQ9H3K2 345 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 DEPPQ9NTK1 212 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 PTTG3PQ9NZH4 202 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 ALPK2Q86TB3 2170 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 ZNF716A6NP11 495 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 MASP2O00187 686 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 CYTIPO60759 359 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 PEX14O75381 377 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 NEURL1O76050 574 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 ALX3O95076 343 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 CST2P09228 141 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 KLK2P20151 261 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 OTX1P32242 354 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 GNALP38405 381 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 Q6ZSR3 168 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 OR8B12Q8NGG6 310 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 OR1J2Q8NGS2 313 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 OR10D3Q8NH80 312 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 SPTSSAQ969W0 71 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 MED30Q96HR3 178 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 KLF13Q9Y2Y9 288 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 SDK2Q58EX2 2172 aa15.25■□□□□ 0.03
TRAPPC11-204ENST00000505676 OR6C65A6NJZ3 312 aa15.24■□□□□ 0.03
TRAPPC11-204ENST00000505676 H3BSH0 61 aa15.24■□□□□ 0.03
TRAPPC11-204ENST00000505676 MT-ND4P03905 459 aa15.24■□□□□ 0.03
TRAPPC11-204ENST00000505676 ITGA3P26006 1051 aa15.24■□□□□ 0.03
TRAPPC11-204ENST00000505676 SPOCK1Q08629 439 aa15.24■□□□□ 0.03
TRAPPC11-204ENST00000505676 OR2W3Q7Z3T1 314 aa15.24■□□□□ 0.03
TRAPPC11-204ENST00000505676 ABHD12BQ7Z5M8 362 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC11-204ENST00000505676 C20orf85Q9H1P6 137 aa15.24■□□□□ 0.03
TRAPPC11-204ENST00000505676 ZNF703Q9H7S9 590 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms