RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 CAMTA1Q9Y6Y1 1673 aa3.13□□□□□ -1.91
TRAPPC13-206ENST00000504751 COLCA2A8K830 154 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 HUS1O60921 280 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 E2F6O75461 281 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 YIF1AO95070 293 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 OTCP00480 354 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 CSTAP01040 98 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 RALBP11234 206 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 ERGP11308 486 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 EIF2S2P20042 333 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 U2AF2P26368 475 aaKnown RBP eCLIP3.12□□□□□ -1.917e-7■■■■□ 21.2
TRAPPC13-206ENST00000504751 STOMP27105 288 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 OR1E1P30953 314 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 MAGEA1P43355 309 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 UBE2NP61088 152 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 XIAPP98170 497 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 HIKESHIQ53FT3 197 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 XKR4Q5GH76 650 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 ZNF684Q5T5D7 378 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 AVPI1Q5T686 147 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 PIP5KL1Q5T9C9 394 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 BZW1Q7L1Q6 419 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 LGI3Q8N145 548 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 C11orf72Q8NBR9 251 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 OR52E2Q8NGJ4 325 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 OR8U1Q8NH10 309 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 OR8K3Q8NH51 312 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 ISG20Q96AZ6 181 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 C8orf44Q96CB5 159 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 C19orf60Q96EN9 201 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 XPO6Q96QU8 1125 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 ZNF382Q96SR6 550 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 TIMM17AQ99595 171 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 RHOXF2Q9BQY4 288 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 PTTG3PQ9NZH4 202 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 TRMT112Q9UI30 125 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 TSSC4Q9Y5U2 329 aaPredicted RBP3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 RFNGQ9Y644 331 aa3.12□□□□□ -1.91
TRAPPC13-206ENST00000504751 H7C417 338 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 RDH16O75452 317 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 APCSP02743 223 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 LINC00869P0C866 280 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 RAB3AP20336 220 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 DTYMKP23919 212 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 RPS5P46782 204 aaKnown RBP3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 HCAR3P49019 387 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 TTC19Q6DKK2 380 aaPredicted RBP3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 TTC23LQ6PF05 361 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 NPSR1Q6W5P4 371 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 CALHM1Q8IU99 346 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 CDKL3Q8IVW4 592 aaPredicted RBP3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 ZNF709Q8N972 641 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 OR9G4Q8NGQ1 327 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 COQ8AQ8NI60 647 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 ZNF461Q8TAF7 563 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 TSEN15Q8WW01 171 aaKnown RBP3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 APH1BQ8WW43 257 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 RBMXL1Q96E39 390 aaKnown RBP3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 PRRC1Q96M27 445 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 ZNF396Q96N95 335 aaPredicted RBP3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 BPIFA3Q9BQP9 254 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 C11orf70Q9BRQ4 267 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 RSPO3Q9BXY4 272 aaPredicted RBP3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 ACTR3CQ9C0K3 210 aaPredicted RBP3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 EDA2RQ9HAV5 297 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 DDX19AQ9NUU7 478 aaKnown RBP3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 MTFP1Q9UDX5 166 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 ZNF835Q9Y2P0 537 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 INSRP06213 1382 aa3.11□□□□□ -1.91
TRAPPC13-206ENST00000504751 TNS2Q63HR2 1409 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 SUPT3HB4E1H0 165 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 DNASE2O00115 360 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 NDUFS8O00217 210 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 BPY2O14599 106 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 CETN3O15182 167 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 SOCS1O15524 211 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 FOXH1O75593 365 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 CTSLP07711 333 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 ERCC1P07992 297 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 ZNF286BP0CG31 522 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 NPY1RP25929 384 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 NUP62P37198 522 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 KIR3DL2P43630 455 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 P2RX1P51575 399 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 CLDN8P56748 225 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 VSX2P58304 361 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 DNAJC3Q13217 504 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 ILKQ13418 452 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 SYCP1Q15431 976 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 LY6EQ16553 131 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 CHRFAM7AQ494W8 412 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 LIN9Q5TKA1 542 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 SAXO2Q658L1 398 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 MBOAT2Q6ZWT7 520 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 EIF3MQ7L2H7 374 aaKnown RBP3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 LUZP2Q86TE4 346 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 KATNAL2Q8IYT4 538 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 FAM9CQ8IZT9 166 aa3.1□□□□□ -1.91
TRAPPC13-206ENST00000504751 GABRG1Q8N1C3 465 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms