RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 TANC2Q9HCD6 1990 aa10.25□□□□□ -0.77
PDLIM5-208ENST00000504489 NAV2Q8IVL1 2488 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 F5H5K5 113 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 H3BSA7 217 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 J3QW42 95 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 GPRIN2O60269 458 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 ATE1O95260 518 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 CLIC3O95833 236 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 ABHD16AO95870 558 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 NGFP01138 241 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 CD8AP01732 235 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 SOD3P08294 240 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 MRPL3P09001 348 aaKnown RBP10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 OR4A8P0C604 315 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 ACSM4P0C7M7 580 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 OR2T7P0C7T2 308 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 ZNF250P15622 560 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 EVX1P49640 407 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 HCCSP53701 268 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 AQP4P55087 323 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 TPTEP56180 551 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 PPP1CBP62140 327 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 GRB2P62993 217 aaKnown RBP10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 IL5RAQ01344 420 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 MAD2L1BPQ15013 274 aaPredicted RBP10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 TAF13Q15543 124 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 EFNB3Q15768 340 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 MSMPQ1L6U9 139 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 MST1LQ2TV78 715 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 RGS7BPQ6MZT1 257 aaPredicted RBP10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 DEGS2Q6QHC5 323 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 COLCA1Q6ZS62 124 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 USP51Q70EK9 711 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 CDH24Q86UP0 819 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 OR51G2Q8NGK0 314 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 OR1J1Q8NGS3 322 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 OR2T27Q8NH04 317 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 APH1BQ8WW43 257 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 ASB17Q8WXJ9 295 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 PIGTQ969N2 578 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 MRPL24Q96A35 216 aaKnown RBP10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 MBD6Q96DN6 1003 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 COG8Q96MW5 612 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 COPS4Q9BT78 406 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 TRAF4Q9BUZ4 470 aaPredicted RBP10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 C1QTNF5Q9BXJ0 243 aa10.24□□□□□ -0.77
PDLIM5-208ENST00000504489 YLPM1P49750 1951 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 DYSFO75923 2080 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 MYO9AB2RTY4 2548 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 TMEM129A0AVI4 362 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 B9A039 149 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 M0R135 149 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 OVOL3O00110 214 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 PHYHO14832 338 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 WBP4O75554 376 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 APOC1P02654 83 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 LCKP06239 509 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 GNAO1P09471 354 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 DNASE1P24855 282 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 ATP6V1E1P36543 226 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 VHLP40337 213 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 OPRL1P41146 370 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 ROM1Q03395 351 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 SWI5Q1ZZU3 235 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 C11orf71Q6IPW1 123 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 KCTD18Q6PI47 426 aaPredicted RBP10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 DRAM2Q6UX65 266 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 RFPL4BQ6ZWI9 263 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 SLC35F2Q8IXU6 374 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 C8orf59Q8N0T1 100 aaPredicted RBP10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 OR5L1Q8NGL2 311 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 ABHD4Q8TB40 342 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 APOBEC3DQ96AK3 386 aaPredicted RBP10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 RNFT2Q96EX2 444 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 ZNF799Q96GE5 643 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 MARS2Q96GW9 593 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 DOK1Q99704 481 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 CCL19Q99731 98 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 OR51B6Q9H340 312 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 NIPAL2Q9H841 368 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 MRPS18AQ9NVS2 196 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 FBXO9Q9UK97 447 aaPredicted RBP10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 COPS3Q9UNS2 423 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 LAMP3Q9UQV4 416 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 EXOGQ9Y2C4 368 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 PLEKHA6Q9Y2H5 1048 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 STARD10Q9Y365 291 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 PCDHGB1Q9Y5G3 927 aa10.23□□□□□ -0.77
PDLIM5-208ENST00000504489 CSMD2Q7Z408 3487 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 CCDC168Q8NDH2 2452 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 IGLV3-9A0A075B6K5 115 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 CYSRT1A8MQ03 144 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 ZNF670-ZNF695F2Z2N8 137 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 J3QRE1 110 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 ZNF254O75437 659 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 H2BFMP0C1H6 154 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 DBTP11182 482 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 BMP4P12644 408 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 DCTDP32321 178 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 HSPA13P48723 471 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms