RNA–Protein interactions for RNA: ENST00000504263.1

PCAT4-201, prostate cancer associated transcript 4, humanhuman

TSL 1 (best) BASIC

Gene PCAT4, Length 2,091 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT4-201ENST00000504263 PCGF3Q3KNV8 242 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 RNASE12Q5GAN4 147 aaKnown RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 C10orf120Q5SQS8 335 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 TMEM69Q5SWH9 247 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 KHDRBS2Q5VWX1 349 aaKnown RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 PWWP2BQ6NUJ5 590 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 NOXRED1Q6NXP6 359 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 FBXO42Q6P3S6 717 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 PRSS54Q6PEW0 395 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 TMPPEQ6ZT21 453 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 LYG2Q86SG7 212 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 BIVMQ86UB2 503 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 RTN4RL1Q86UN2 441 aaPredicted RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 SLC25A42Q86VD7 318 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 NRSN1Q8IZ57 195 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 GBGT1Q8N5D6 347 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 OR13C4Q8NGS5 318 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 OR2L2Q8NH16 312 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 SLC2A12Q8TD20 617 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 HASPINQ8TF76 798 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 CLEC4CQ8WTT0 213 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 BPIFA2Q96DR5 249 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 KTI12Q96EK9 354 aaPredicted RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 TMEM56Q96MV1 263 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 CLUHP3Q96NS8 147 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 SMOQ99835 787 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 NDC1Q9BTX1 674 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 TBL1XR1Q9BZK7 514 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 SLITRK2Q9H156 845 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 HIPK2Q9H2X6 1198 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 SLCO5A1Q9H2Y9 848 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 DPEP2Q9H4A9 486 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 ZNF430Q9H8G1 570 aaPredicted RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 RPF1Q9H9Y2 349 aaKnown RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 IL21RQ9HBE5 538 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 MKKSQ9NPJ1 570 aaPredicted RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 PRDM6Q9NQX0 595 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 SLC17A5Q9NRA2 495 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 LYRM2Q9NU23 88 aaPredicted RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 MRPL15Q9P015 296 aaKnown RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 B3GAT1Q9P2W7 334 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 SHPKQ9UHJ6 478 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 CD84Q9UIB8 345 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 PSG11Q9UQ72 335 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 AKT3Q9Y243 479 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 STRAPQ9Y3F4 350 aaKnown RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 SIRT4Q9Y6E7 314 aaPredicted RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 TMEM56-RWDD3S4R434 201 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 CCDC88CQ9P219 2028 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 MYO10Q9HD67 2058 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 A0A1W2PR48 441 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 ZNF705GA8MUZ8 300 aaPredicted RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 C5orf67F2Z3F1 127 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 F6UZH7 168 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 K7EPK0 472 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 K7ERU9 68 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 RAB27BO00194 218 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 GAPDHSO14556 408 aaPredicted RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 CYB5BO43169 146 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 ZNF264O43296 627 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 NARSO43776 548 aaKnown RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 CTAG2O75638 210 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 TNFSF15O95150 251 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 DUS4LO95620 317 aaKnown RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 TSPAN15O95858 294 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 GPANK1O95872 356 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 PDYNP01213 254 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 TRBC1P01850 177 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 IGHEP01854 428 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 LCATP04180 440 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 ERCC1P07992 297 aaPredicted RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 SLC35G6P0C7Q6 338 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 SEC11BP0C7V7 166 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 PET100P0DJ07 73 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 COX7A2P14406 83 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 TNFRSF1BP20333 461 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 DGKAP23743 735 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 MMP11P24347 488 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 GNRHRP30968 328 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 TLX1P31314 330 aaPredicted RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 OR3A2P47893 321 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 RPL29P47914 159 aaKnown RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 DGKEP52429 567 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 PRKAG1P54619 331 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 PRRX1P54821 245 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 UBE2MP61081 183 aaKnown RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 HBA1P69905 142 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 HTD2P86397 168 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 ZP2Q05996 745 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 ZNF616Q08AN1 781 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 SLC10A7Q0GE19 358 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 CNN3Q15417 329 aaKnown RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 DECR1Q16698 335 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 BSXQ3C1V8 233 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 ZNF791Q3KP31 576 aaPredicted RBP3.16□□□□□ -1.9
PCAT4-201ENST00000504263 OXLD1Q5BKU9 147 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 SOHLH1Q5JUK2 328 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 REEP3Q6NUK4 255 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 PODNL1Q6PEZ8 512 aa3.16□□□□□ -1.9
PCAT4-201ENST00000504263 PET117Q6UWS5 81 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms