RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 JSRP1Q96MG2 331 aaPredicted RBP3.06□□□□□ -1.92
TRAPPC13-205ENST00000504243 COL21A1Q96P44 957 aa3.06□□□□□ -1.92
TRAPPC13-205ENST00000504243 ZNF317Q96PQ6 595 aaPredicted RBP3.06□□□□□ -1.92
TRAPPC13-205ENST00000504243 PAIP2Q9BPZ3 127 aaKnown RBP3.06□□□□□ -1.92
TRAPPC13-205ENST00000504243 LYRM4Q9HD34 91 aa3.06□□□□□ -1.92
TRAPPC13-205ENST00000504243 MYOZ1Q9NP98 299 aaPredicted RBP3.06□□□□□ -1.92
TRAPPC13-205ENST00000504243 RPRD1BQ9NQG5 326 aaKnown RBP3.06□□□□□ -1.92
TRAPPC13-205ENST00000504243 ZC4H2Q9NQZ6 224 aa3.06□□□□□ -1.92
TRAPPC13-205ENST00000504243 ZNF355PQ9NSJ1 428 aa3.06□□□□□ -1.92
TRAPPC13-205ENST00000504243 DDX19AQ9NUU7 478 aaKnown RBP3.06□□□□□ -1.92
TRAPPC13-205ENST00000504243 SLC39A1Q9NY26 324 aa3.06□□□□□ -1.92
TRAPPC13-205ENST00000504243 GPATCH8Q9UKJ3 1502 aaKnown RBP3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 IGLV4-60A0A075B6I1 120 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 TRAV25A0A0B4J276 109 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 NCBP2LA6PVI3 153 aaKnown RBP3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 H7C1H1 209 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 PLPP1O14494 284 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 RP2O75695 350 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 MRPL3P09001 348 aaKnown RBP3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 ATF6P18850 670 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 NPY1RP25929 384 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 TNFSF9P41273 254 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 ESRRGP62508 458 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 SYCNQ0VAF6 134 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 C16orf72Q14CZ0 275 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 PLCXD3Q63HM9 321 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 STUMQ69YW2 141 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 ZNF695Q8IW36 515 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 UBALD1Q8TB05 177 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 CAMK2N2Q96S95 79 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 HSD17B10Q99714 261 aaKnown RBP3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 BCL7BQ9BQE9 202 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 ANKRD60Q9BZ19 345 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 UBE2ZQ9H832 354 aaPredicted RBP3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 ZNF430Q9H8G1 570 aaPredicted RBP3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 NTN4Q9HB63 628 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 WFDC1Q9HC57 220 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 MRPS30Q9NP92 439 aaKnown RBP3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 CHTOPQ9Y3Y2 248 aaKnown RBP3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 YTHDF2Q9Y5A9 579 aaKnown RBP3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 TMEM14AQ9Y6G1 99 aa3.05□□□□□ -1.92
TRAPPC13-205ENST00000504243 GAKO14976 1311 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 TMEM120BA0PK00 339 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 GABRPO00591 440 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 BCKDKO14874 412 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 POLR2MP0CAP2 368 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 CD37P11049 281 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 CTRB1P17538 263 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 IGFBP3P17936 291 aaPredicted RBP3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 TCP1P17987 556 aaKnown RBP3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 RBM34P42696 430 aaKnown RBP3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 IRF8Q02556 426 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 RAD51Q06609 339 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 C16orf87Q6PH81 154 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 HORMAD1Q86X24 394 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 NKAIN4Q8IVV8 208 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 LGI3Q8N145 548 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 NPWQ8N729 165 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 C15orf56Q8N910 161 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 OR56A4Q8NGH8 313 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 OR52K1Q8NGK4 314 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 OR8U1Q8NH10 309 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 DCPSQ96C86 337 aaKnown RBP3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 NRBF2Q96F24 287 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 LZTS2Q9BRK4 669 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 DDX19BQ9UMR2 479 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 RCL1Q9Y2P8 373 aaKnown RBP3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 DENND4AQ7Z401 1863 aa3.04□□□□□ -1.92
TRAPPC13-205ENST00000504243 PLEKHG2Q9H7P9 1386 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 TNIKQ9UKE5 1360 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 MROH5Q6ZUA9 1318 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 A0A1W2PRD5 423 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 TMEM223A0PJW6 202 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 RSPH10B2B2RC85 870 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 NME4O00746 187 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 CASC3O15234 703 aaKnown RBP3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 RBFOX2O43251 390 aaKnown RBP eCLIP3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 AKR7A2O43488 359 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 AQP8O94778 261 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 SEMA3DO95025 777 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 HPRT1P00492 218 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 RSPH10BP0C881 870 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 TALDO1P37837 337 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 LINC00315P59091 139 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 TAS2R46P59540 309 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 RPS15AP62244 130 aaKnown RBP3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 NCF4Q15080 339 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 HADHQ16836 314 aaKnown RBP3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 CHRFAM7AQ494W8 412 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 PIP5KL1Q5T9C9 394 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 ADNP2Q6IQ32 1131 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 MYOCDQ8IZQ8 938 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 VKORC1L1Q8N0U8 176 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 CSGALNACT2Q8N6G5 542 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 FAM184AQ8NB25 1140 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 GPR26Q8NDV2 337 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 C15orf40Q8WUR7 153 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 FRZBQ92765 325 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 PTX4Q96A99 478 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms