RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 FBXO4Q9UKT5 387 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SLC22A14Q9Y267 594 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 FAM230AA0A1W2PPH8 454 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 GABRR3A8MPY1 467 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 A8MXE2 369 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ANKRD66B4E2M5 251 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SIGLEC5O15389 551 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 EIF4E2O60573 245 aaKnown RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CTNSO60931 367 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SCAF4O95104 1147 aaKnown RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 LRG1P02750 347 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 RPLP1P05386 114 aaKnown RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 IGHV4-34P06331 123 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ERCC1P07992 297 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 FAHP16930 419 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 BMP5P22003 454 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CDK2P24941 298 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CD82P27701 267 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CHATP28329 748 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SLC6A6P31641 620 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 APOBEC3AP31941 199 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 THBS4P35443 961 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 THBS3P49746 956 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 AGFG1P52594 562 aaKnown RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 FBXW4P57775 412 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 OSTNP61366 133 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SIRPAP78324 504 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SRPXP78539 464 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 LSM11P83369 360 aaKnown RBP eCLIP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 LINC00303Q3SY05 128 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SPDYE7PQ495Y7 208 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 Q499Y3 187 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 PSMG4Q5JS54 123 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 IL20RBQ6UXL0 311 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 HFE2Q6ZVN8 426 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 VN1R4Q7Z5H5 301 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 DTWD2Q8NBA8 298 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 OR6K2Q8NGY2 324 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 HUS1BQ8NHY5 278 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 GRHL3Q8TE85 626 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 GPX8Q8TED1 209 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 PPP1R1CQ8WVI7 109 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TMED6Q8WW62 240 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 THAP4Q8WY91 577 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SPSB4Q96A44 273 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CCDC74AQ96AQ1 378 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ANKRD9Q96BM1 317 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TMEM19Q96HH6 336 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CCDC74BQ96LY2 380 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 DDA1Q9BW61 102 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 C1QTNF6Q9BXI9 259 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TBL1XR1Q9BZK7 514 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 BARX1Q9HBU1 254 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 PRDM7Q9NQW5 492 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CFAP97Q9P2B7 532 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SLC2A6Q9UGQ3 507 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 APOBEC3BQ9UH17 382 aaKnown RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CYP8B1Q9UNU6 501 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SH2B3Q9UQQ2 575 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 STARD10Q9Y365 291 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ENTPD2Q9Y5L3 495 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 PTPRZ1P23471 2315 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF462Q96JM2 2506 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 LRBAP50851 2863 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 A0A1B0GV90 55 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 FAM171A2A8MVW0 826 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 A8MWP6 167 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 OR2C1O95371 312 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 NME1P15531 152 aaKnown RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ATF1P18846 271 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 MST1P26927 711 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 AQP1P29972 269 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 PBLDP30039 288 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 PRDX3P30048 256 aaKnown RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 NTSP30990 170 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 NPBWR1P48145 328 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 MTCP1P56278 107 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ZP1P60852 638 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 PDCD1Q15116 288 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ELOCQ15369 112 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TMEM176BQ3YBM2 270 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 AGBL4Q5VU57 503 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TMEM268Q5VZI3 342 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 LEMD1Q68G75 181 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 MBOAT1Q6ZNC8 495 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF620Q6ZNG0 422 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 MEPCEQ7L2J0 689 aaKnown RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 RABEPKQ7Z6M1 372 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TMEM229BQ8NBD8 167 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 RELL2Q8NC24 303 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 OR56B2PQ8NGI1 322 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 OR52I2Q8NH67 350 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 LYPD6BQ8NI32 183 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 WIPF2Q8TF74 440 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TMEM159Q96B96 161 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF414Q96IQ9 312 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 MEGF10Q96KG7 1140 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TECTBQ96PL2 329 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 LGR4Q9BXB1 951 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 PCBD2Q9H0N5 130 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms