RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 OR13C2Q8NGS9 318 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 RP9Q8TA86 221 aaKnown RBP5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 SLC7A13Q8TCU3 470 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 NPRL2Q8WTW4 380 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 WFDC12Q8WWY7 111 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 DYRK2Q92630 601 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 TPD52L3Q96J77 140 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 DHRS1Q96LJ7 313 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 Q96M85 177 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 NUDT16L1Q9BRJ7 211 aaKnown RBP5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 HCAR1Q9BXC0 346 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 SYT4Q9H2B2 425 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 MMP27Q9H306 513 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 POFUT1Q9H488 388 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 EMC7Q9NPA0 242 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 KRCC1Q9NPI7 259 aaPredicted RBP5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 SAR1AQ9NR31 198 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 TMEM100Q9NV29 134 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 KIF17Q9P2E2 1029 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 ASH2LQ9UBL3 628 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 KAAG1Q9UBP8 84 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 CLN8Q9UBY8 286 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 KCNG2Q9UJ96 466 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 ADAM18Q9Y3Q7 739 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 ENPP4Q9Y6X5 453 aa5.09□□□□□ -1.59
LSM3P4-201ENST00000502948 IGLV1-36A0A0B4J1U3 117 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 TRAV40A0A0B4J280 105 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 CLPSL1A2RUU4 121 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 ZNF879B4DU55 563 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 M0QZ24 198 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 CXCR6O00574 342 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 RER1O15258 196 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 GPR37O15354 613 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 HOXA3O43365 443 aaPredicted RBP5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 IDH3BO43837 385 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 SLC16A7O60669 478 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 SHOX2O60902 331 aaPredicted RBP5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 TROVE2P10155 538 aaKnown RBP eCLIP5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 IRF2P14316 349 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 MMP9P14780 707 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 RHCEP18577 417 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 MDKP21741 143 aaPredicted RBP5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 OTX1P32242 354 aaPredicted RBP5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 OMPP47874 163 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 PITPNBP48739 271 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 SLC7A2P52569 658 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 FXYD6P3P58550 94 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 DEFA6Q01524 100 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 MZT1Q08AG7 82 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 KRR1Q13601 381 aaKnown RBP5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 GK2Q14410 553 aaPredicted RBP5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 RSPO1Q2MKA7 263 aaPredicted RBP5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 SLC36A3Q495N2 470 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 LRRC23Q53EV4 343 aaPredicted RBP5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 CLEC12AQ5QGZ9 265 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 OLFML2AQ68BL7 652 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 RHOUQ7L0Q8 258 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 TSEN54Q7Z6J9 526 aaKnown RBP5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 IGFN1Q86VF2 1251 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 SLC15A3Q8IY34 581 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 PNLDC1Q8NA58 520 aaKnown RBP5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 ATG16L2Q8NAA4 619 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 SLC26A10Q8NG04 563 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 OR10S1Q8NGN2 331 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 OR11L1Q8NGX0 322 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 SSMEM1Q8WWF3 244 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 ITFG2Q969R8 447 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 FUZQ9BT04 418 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 TMEM120AQ9BXJ8 343 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 NUAK2Q9H093 628 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 OPA3Q9H6K4 179 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 C1RLQ9NZP8 487 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 MRPL15Q9P015 296 aaKnown RBP5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 ABCD2Q9UBJ2 740 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 CD300AQ9UGN4 299 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 CYB5R1Q9UHQ9 305 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 RPS6KA6Q9UK32 745 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 COA3Q9Y2R0 106 aaPredicted RBP5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 SNX13Q9Y5W8 968 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 LHFPL6Q9Y693 200 aa5.08□□□□□ -1.6
LSM3P4-201ENST00000502948 TRAV38-1A0A0B4J264 116 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 CENPVL3A0A0U1RRI6 287 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 FAM181BA6NEQ2 426 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 H7C1C5 153 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 J3KTA2 159 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 ZNF682O95780 498 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 CYB5R3P00387 301 aaPredicted RBP5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 KNG1P01042 644 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 LHBP01229 141 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 CRYBA1P05813 215 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 H1F0P07305 194 aaKnown RBP5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 MELTFP08582 738 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 ACSM4P0C7M7 580 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 FUT4P22083 530 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 FPR3P25089 353 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 GGT2P36268 569 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 CFHR2P36980 270 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 DDOSTP39656 456 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 MDH1P40925 334 aaKnown RBP5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 PMELP40967 661 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms