RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 ZNF275Q9NSD4 429 aaPredicted RBP16.04■□□□□ 0.16
LINC00535-201ENST00000501400 TMEM38BQ9NVV0 291 aa16.04■□□□□ 0.16
LINC00535-201ENST00000501400 CAMK2AQ9UQM7 478 aa16.04■□□□□ 0.16
LINC00535-201ENST00000501400 SLC5A6Q9Y289 635 aa16.04■□□□□ 0.16
LINC00535-201ENST00000501400 C5orf63A6NC05 138 aa16.04■□□□□ 0.16
LINC00535-201ENST00000501400 E9PLN8 166 aa16.04■□□□□ 0.16
LINC00535-201ENST00000501400 SLC17A2O00624 439 aa16.04■□□□□ 0.16
LINC00535-201ENST00000501400 EEF1E1O43324 174 aaKnown RBP16.04■□□□□ 0.16
LINC00535-201ENST00000501400 RSPO1Q2MKA7 263 aaPredicted RBP16.04■□□□□ 0.16
LINC00535-201ENST00000501400 RIPPLY2Q5TAB7 128 aa16.04■□□□□ 0.16
LINC00535-201ENST00000501400 IGFL2Q6UWQ7 119 aa16.04■□□□□ 0.16
LINC00535-201ENST00000501400 UBE2J2Q8N2K1 259 aa16.04■□□□□ 0.16
LINC00535-201ENST00000501400 TMEM178AQ8NBL3 297 aa16.04■□□□□ 0.16
LINC00535-201ENST00000501400 SYNPRQ8TBG9 265 aa16.04■□□□□ 0.16
LINC00535-201ENST00000501400 OR51E1Q8TCB6 317 aa16.04■□□□□ 0.16
LINC00535-201ENST00000501400 CPT1CQ8TCG5 803 aa16.04■□□□□ 0.16
LINC00535-201ENST00000501400 RFT1Q96AA3 541 aa16.04■□□□□ 0.16
LINC00535-201ENST00000501400 ADAT3Q96EY9 351 aaPredicted RBP16.04■□□□□ 0.16
LINC00535-201ENST00000501400 THAP7Q9BT49 309 aaPredicted RBP16.04■□□□□ 0.16
LINC00535-201ENST00000501400 KCNK15Q9H427 330 aa16.04■□□□□ 0.16
LINC00535-201ENST00000501400 CKLFQ9UBR5 152 aa16.04■□□□□ 0.16
LINC00535-201ENST00000501400 SYT7O43581 403 aa16.03■□□□□ 0.16
LINC00535-201ENST00000501400 FAM157BP0CG42 384 aa16.03■□□□□ 0.16
LINC00535-201ENST00000501400 OTX1P32242 354 aaPredicted RBP16.03■□□□□ 0.16
LINC00535-201ENST00000501400 KIR2DL3P43628 341 aa16.03■□□□□ 0.16
LINC00535-201ENST00000501400 MAP2K3P46734 347 aa16.03■□□□□ 0.16
LINC00535-201ENST00000501400 MMP15P51511 669 aa16.03■□□□□ 0.16
LINC00535-201ENST00000501400 SCAND1P57086 179 aa16.03■□□□□ 0.16
LINC00535-201ENST00000501400 DGCR2P98153 550 aa16.03■□□□□ 0.16
LINC00535-201ENST00000501400 BCL2A1Q16548 175 aa16.03■□□□□ 0.16
LINC00535-201ENST00000501400 BAIAP2L2Q6UXY1 529 aa16.03■□□□□ 0.16
LINC00535-201ENST00000501400 LYPD6Q86Y78 171 aa16.03■□□□□ 0.16
LINC00535-201ENST00000501400 OR1J2Q8NGS2 313 aa16.03■□□□□ 0.16
LINC00535-201ENST00000501400 FNDC9Q8TBE3 224 aa16.03■□□□□ 0.16
LINC00535-201ENST00000501400 YIPF5Q969M3 257 aa16.03■□□□□ 0.16
LINC00535-201ENST00000501400 HAVCR1Q96D42 359 aa16.03■□□□□ 0.16
LINC00535-201ENST00000501400 ZDHHC11Q9H8X9 412 aa16.03■□□□□ 0.16
LINC00535-201ENST00000501400 ETAA1Q9NY74 926 aa16.03■□□□□ 0.16
LINC00535-201ENST00000501400 RHBDD3Q9Y3P4 386 aa16.03■□□□□ 0.16
LINC00535-201ENST00000501400 FREM1Q5H8C1 2179 aa16.03■□□□□ 0.16
LINC00535-201ENST00000501400 RTTNQ86VV8 2226 aa16.02■□□□□ 0.16
LINC00535-201ENST00000501400 BOLA2-SMG1P6H3BVE0 249 aa16.02■□□□□ 0.16
LINC00535-201ENST00000501400 TMIGD3P0DMS9 266 aaPredicted RBP16.02■□□□□ 0.16
LINC00535-201ENST00000501400 GALK2Q01415 458 aa16.02■□□□□ 0.16
LINC00535-201ENST00000501400 PMP22Q01453 160 aa16.02■□□□□ 0.16
LINC00535-201ENST00000501400 CD300CQ08708 224 aa16.02■□□□□ 0.16
LINC00535-201ENST00000501400 SLC10A1Q14973 349 aa16.02■□□□□ 0.16
LINC00535-201ENST00000501400 SERPINA12Q8IW75 414 aa16.02■□□□□ 0.16
LINC00535-201ENST00000501400 ZNF283Q8N7M2 679 aa16.02■□□□□ 0.16
LINC00535-201ENST00000501400 OR51D1Q8NGF3 324 aa16.02■□□□□ 0.16
LINC00535-201ENST00000501400 SLC25A28Q96A46 364 aa16.02■□□□□ 0.16
LINC00535-201ENST00000501400 FGGYQ96C11 551 aa16.02■□□□□ 0.16
LINC00535-201ENST00000501400 HDHD2Q9H0R4 259 aa16.02■□□□□ 0.16
LINC00535-201ENST00000501400 MMP28Q9H239 520 aa16.02■□□□□ 0.16
LINC00535-201ENST00000501400 SPRR3Q9UBC9 169 aa16.02■□□□□ 0.16
LINC00535-201ENST00000501400 MRPS7Q9Y2R9 242 aaKnown RBP16.02■□□□□ 0.16
LINC00535-201ENST00000501400 SPENQ96T58 3664 aaKnown RBP16.02■□□□□ 0.16
LINC00535-201ENST00000501400 CTDSPLO15194 276 aa16.02■□□□□ 0.15
LINC00535-201ENST00000501400 LYRM1O43325 122 aa16.02■□□□□ 0.15
LINC00535-201ENST00000501400 ACTL6AO96019 429 aa16.02■□□□□ 0.15
LINC00535-201ENST00000501400 B4GALT1P15291 398 aa16.02■□□□□ 0.15
LINC00535-201ENST00000501400 CCL1P22362 96 aa16.02■□□□□ 0.15
LINC00535-201ENST00000501400 SPOCK1Q08629 439 aa16.02■□□□□ 0.15
LINC00535-201ENST00000501400 CEACAM16Q2WEN9 425 aa16.02■□□□□ 0.15
LINC00535-201ENST00000501400 ELFN2Q5R3F8 820 aa16.02■□□□□ 0.15
LINC00535-201ENST00000501400 FAM57BQ71RH2 274 aa16.02■□□□□ 0.15
LINC00535-201ENST00000501400 SLC7A6Q92536 515 aa16.02■□□□□ 0.15
LINC00535-201ENST00000501400 GCDHQ92947 438 aaPredicted RBP16.02■□□□□ 0.15
LINC00535-201ENST00000501400 ZFP3Q96NJ6 502 aa16.02■□□□□ 0.15
LINC00535-201ENST00000501400 DEFB127Q9H1M4 99 aa16.02■□□□□ 0.15
LINC00535-201ENST00000501400 AUNIPQ9H7T9 357 aa16.02■□□□□ 0.15
LINC00535-201ENST00000501400 GPR35Q9HC97 309 aa16.02■□□□□ 0.15
LINC00535-201ENST00000501400 RBFOX1Q9NWB1 397 aaKnown RBP16.02■□□□□ 0.15
LINC00535-201ENST00000501400 CGGBP1Q9UFW8 167 aaPredicted RBP16.02■□□□□ 0.15
LINC00535-201ENST00000501400 NOSIPQ9Y314 301 aaKnown RBP16.02■□□□□ 0.15
LINC00535-201ENST00000501400 N6AMT1Q9Y5N5 214 aa16.02■□□□□ 0.15
LINC00535-201ENST00000501400 A0A1B0GVI7 797 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 LOC390937A0A1W2PQ73 354 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 ACOT7O00154 380 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 IGLV3-1P01715 115 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 CST2P09228 141 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 CD3GP09693 182 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 PTH2RP49190 550 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 POU3F4P49335 361 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 EFNB2P52799 333 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 RAB11BQ15907 218 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 SLC36A2Q495M3 483 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 RNASE12Q5GAN4 147 aaKnown RBP16.01■□□□□ 0.15
LINC00535-201ENST00000501400 TSPO2Q5TGU0 170 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 ZNF57Q68EA5 555 aaPredicted RBP16.01■□□□□ 0.15
LINC00535-201ENST00000501400 ZNF529Q6P280 563 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 ABHD12BQ7Z5M8 362 aaPredicted RBP16.01■□□□□ 0.15
LINC00535-201ENST00000501400 BIVMQ86UB2 503 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 NAA40Q86UY6 237 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 GLCCI1Q86VQ1 547 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 RAB40AQ8WXH6 277 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 ZC3HAV1LQ96H79 300 aaKnown RBP16.01■□□□□ 0.15
LINC00535-201ENST00000501400 FOXB1Q99853 325 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 GPR84Q9NQS5 396 aa16.01■□□□□ 0.15
LINC00535-201ENST00000501400 PAQR5Q9NXK6 330 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms