RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 DBPQ10586 325 aaPredicted RBP13.1□□□□□ -0.31
NUP50-219ENST00000497960 AQP6Q13520 282 aa13.1□□□□□ -0.31
NUP50-219ENST00000497960 SPATA46Q5T0L3 261 aa13.1□□□□□ -0.31
NUP50-219ENST00000497960 FAM166AQ6J272 317 aa13.1□□□□□ -0.31
NUP50-219ENST00000497960 PLBD1Q6P4A8 553 aa13.1□□□□□ -0.31
NUP50-219ENST00000497960 ZBTB46Q86UZ6 589 aa13.1□□□□□ -0.31
NUP50-219ENST00000497960 ZNF555Q8NEP9 628 aa13.1□□□□□ -0.31
NUP50-219ENST00000497960 OR6K6Q8NGW6 343 aa13.1□□□□□ -0.31
NUP50-219ENST00000497960 SLC25A40Q8TBP6 338 aa13.1□□□□□ -0.31
NUP50-219ENST00000497960 HPS1Q92902 700 aa13.1□□□□□ -0.31
NUP50-219ENST00000497960 MARS2Q96GW9 593 aaKnown RBP13.1□□□□□ -0.31
NUP50-219ENST00000497960 C4orf45Q96LM5 186 aa13.1□□□□□ -0.31
NUP50-219ENST00000497960 TMEM160Q9NX00 188 aa13.1□□□□□ -0.31
NUP50-219ENST00000497960 PLEK2Q9NYT0 353 aa13.1□□□□□ -0.31
NUP50-219ENST00000497960 CDC42EP3Q9UKI2 254 aa13.1□□□□□ -0.31
NUP50-219ENST00000497960 KCNS2Q9ULS6 477 aa13.1□□□□□ -0.31
NUP50-219ENST00000497960 GMPPBQ9Y5P6 360 aa13.1□□□□□ -0.31
NUP50-219ENST00000497960 PLSCR5A0PG75 271 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 LRP5LA4QPB2 252 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 H3BSA7 217 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 TPD52L2O43399 206 aaKnown RBP13.09□□□□□ -0.31
NUP50-219ENST00000497960 PRKYO43930 277 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 ICMTO60725 284 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 LILRA1O75019 489 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 NCR1O76036 304 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 GPANK1O95872 356 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 IFNA2P01563 188 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 GAAP10253 952 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 CLUP10909 449 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 COL8A2P25067 703 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 GGT2P36268 569 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 MAGEB1P43366 347 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 TMEM33P57088 247 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 RPS7P62081 194 aaKnown RBP13.09□□□□□ -0.31
NUP50-219ENST00000497960 CCL8P80075 99 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 KLHL12Q53G59 568 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 ZNF362Q5T0B9 420 aaPredicted RBP13.09□□□□□ -0.31
NUP50-219ENST00000497960 MBNL2Q5VZF2 373 aaKnown RBP13.09□□□□□ -0.31
NUP50-219ENST00000497960 RFPL4BQ6ZWI9 263 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 VASH1Q7L8A9 365 aaPredicted RBP13.09□□□□□ -0.31
NUP50-219ENST00000497960 CPOQ8IVL8 374 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 TCEANCQ8N8B7 351 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 OR51L1Q8NGJ5 315 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 TMEM163Q8TC26 289 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 KLF14Q8TD94 323 aaPredicted RBP13.09□□□□□ -0.31
NUP50-219ENST00000497960 CYGBQ8WWM9 190 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 MSI2Q96DH6 328 aaKnown RBP13.09□□□□□ -0.31
NUP50-219ENST00000497960 HRASLS5Q96KN8 279 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 DDOQ99489 341 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 PITX2Q99697 317 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 HCAR1Q9BXC0 346 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 BEX2Q9BXY8 128 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 NMNAT2Q9BZQ4 307 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 OR2J1Q9GZK6 312 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 OR51V1Q9H2C8 321 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 CYSLTR2Q9NS75 346 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 DECR2Q9NUI1 292 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 NKIRAS2Q9NYR9 191 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 ASH2LQ9UBL3 628 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 LPAR3Q9UBY5 353 aa13.09□□□□□ -0.31
NUP50-219ENST00000497960 MPZL1O95297 269 aa13.08□□□□□ -0.32
NUP50-219ENST00000497960 TGFAP01135 160 aa13.08□□□□□ -0.32
NUP50-219ENST00000497960 NGFP01138 241 aa13.08□□□□□ -0.32
NUP50-219ENST00000497960 TUBG1P23258 451 aa13.08□□□□□ -0.32
NUP50-219ENST00000497960 LIPAP38571 399 aa13.08□□□□□ -0.32
NUP50-219ENST00000497960 MPV17P39210 176 aa13.08□□□□□ -0.32
NUP50-219ENST00000497960 ZNF81P51508 661 aa13.08□□□□□ -0.32
NUP50-219ENST00000497960 TEKQ02763 1124 aa13.08□□□□□ -0.32
NUP50-219ENST00000497960 KCNMB1Q16558 191 aa13.08□□□□□ -0.32
NUP50-219ENST00000497960 MEP1BQ16820 701 aa13.08□□□□□ -0.32
NUP50-219ENST00000497960 LCN1P1Q5VSP4 162 aa13.08□□□□□ -0.32
NUP50-219ENST00000497960 OTPQ5XKR4 325 aa13.08□□□□□ -0.32
NUP50-219ENST00000497960 NRG4Q8WWG1 115 aa13.08□□□□□ -0.32
NUP50-219ENST00000497960 IPCEF1Q8WWN9 437 aaPredicted RBP13.08□□□□□ -0.32
NUP50-219ENST00000497960 IL4I1Q96RQ9 567 aa13.08□□□□□ -0.32
NUP50-219ENST00000497960 SHARPINQ9H0F6 387 aa13.08□□□□□ -0.32
NUP50-219ENST00000497960 TUBG2Q9NRH3 451 aa13.08□□□□□ -0.32
NUP50-219ENST00000497960 ZNF275Q9NSD4 429 aaPredicted RBP13.08□□□□□ -0.32
NUP50-219ENST00000497960 TBCCD1Q9NVR7 557 aa13.08□□□□□ -0.32
NUP50-219ENST00000497960 GRIP1Q9Y3R0 1128 aa13.08□□□□□ -0.32
NUP50-219ENST00000497960 LOC100130705A0A1B0GUX0 176 aa13.07□□□□□ -0.32
NUP50-219ENST00000497960 TVP23AA6NH52 213 aa13.07□□□□□ -0.32
NUP50-219ENST00000497960 KIAA1324LA8MWY0 1029 aaPredicted RBP13.07□□□□□ -0.32
NUP50-219ENST00000497960 PRODHO43272 600 aa13.07□□□□□ -0.32
NUP50-219ENST00000497960 PPIHO43447 177 aaKnown RBP13.07□□□□□ -0.32
NUP50-219ENST00000497960 CDC14BO60729 498 aa13.07□□□□□ -0.32
NUP50-219ENST00000497960 FMO3P31513 532 aa13.07□□□□□ -0.32
NUP50-219ENST00000497960 APOFQ13790 326 aa13.07□□□□□ -0.32
NUP50-219ENST00000497960 ZMAT1Q5H9K5 638 aa13.07□□□□□ -0.32
NUP50-219ENST00000497960 LYPD4Q6UWN0 246 aa13.07□□□□□ -0.32
NUP50-219ENST00000497960 BBS1Q8NFJ9 593 aa13.07□□□□□ -0.32
NUP50-219ENST00000497960 SLC26A10Q8NG04 563 aa13.07□□□□□ -0.32
NUP50-219ENST00000497960 OR1F12Q8NHA8 337 aa13.07□□□□□ -0.32
NUP50-219ENST00000497960 YIPF5Q969M3 257 aa13.07□□□□□ -0.32
NUP50-219ENST00000497960 COG8Q96MW5 612 aa13.07□□□□□ -0.32
NUP50-219ENST00000497960 FAM118AQ9NWS6 357 aa13.07□□□□□ -0.32
NUP50-219ENST00000497960 CGGBP1Q9UFW8 167 aaPredicted RBP13.07□□□□□ -0.32
NUP50-219ENST00000497960 COMMD3-BMI1R4GMX3 469 aa13.07□□□□□ -0.32
NUP50-219ENST00000497960 DLGAP1O14490 977 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 RER1O15258 196 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms