RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 NEURL3Q96EH8 262 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 CDX2Q99626 313 aaPredicted RBP1.83□□□□□ -2.12
PSPC1-205ENST00000497722 TIMM29Q9BSF4 260 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 ZNF717Q9BY31 904 aaPredicted RBP1.83□□□□□ -2.12
PSPC1-205ENST00000497722 ULBP2Q9BZM5 246 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 OR52D1Q9H346 318 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 TMEM27Q9HBJ8 222 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 NEK6Q9HC98 313 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 RETNQ9HD89 108 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 CCNB1IP1Q9NPC3 277 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 MED4Q9NPJ6 270 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 RABL2BQ9UNT1 228 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 A0A075B6Q4 140 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 CENPVL3A0A0U1RRI6 287 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 H7C417 338 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 CLDN11O75508 207 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 GCM2O75603 506 aaPredicted RBP1.82□□□□□ -2.12
PSPC1-205ENST00000497722 FLOT1O75955 427 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 CCNB2O95067 398 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 CDRT1O95170 752 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 PAHP00439 452 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 CD5P06127 495 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 CT45A6P0DMU7 189 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 CT45A5P0DMU8 189 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 CT45A7P0DMV0 189 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 BCKDHBP21953 392 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 MRPL19P49406 292 aaKnown RBP1.82□□□□□ -2.12
PSPC1-205ENST00000497722 CCNA1P78396 465 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 LIPEQ05469 1076 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 ZNF816Q0VGE8 651 aaPredicted RBP1.82□□□□□ -2.12
PSPC1-205ENST00000497722 MERTKQ12866 999 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 SELENBP1Q13228 472 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 RBMY1FQ15415 496 aaKnown RBP1.82□□□□□ -2.12
PSPC1-205ENST00000497722 ZNF726P1Q15940 193 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 CT45A1Q5HYN5 189 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 SPANXN2Q5MJ10 180 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 MBOAT2Q6ZWT7 520 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 BBS5Q8N3I7 341 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 UBAC2Q8NBM4 344 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 TTLQ8NG68 377 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 CT45A3Q8NHU0 189 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 PHF10Q8WUB8 498 aaKnown RBP1.82□□□□□ -2.12
PSPC1-205ENST00000497722 SLC25A46Q96AG3 418 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 PRRC1Q96M27 445 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 XPO6Q96QU8 1125 aaKnown RBP1.82□□□□□ -2.12
PSPC1-205ENST00000497722 CHP1Q99653 195 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 FGF23Q9GZV9 251 aaPredicted RBP1.82□□□□□ -2.12
PSPC1-205ENST00000497722 RACGAP1Q9H0H5 632 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 ANKRA2Q9H9E1 313 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 AGPAT4Q9NRZ5 378 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 LYARQ9NX58 379 aaKnown RBP1.82□□□□□ -2.12
PSPC1-205ENST00000497722 SLC39A1Q9NY26 324 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 PTTG3PQ9NZH4 202 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 GCNT4Q9P109 453 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 MTFP1Q9UDX5 166 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 VANGL2Q9ULK5 521 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 CAMTA1Q9Y6Y1 1673 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 CABIN1Q9Y6J0 2220 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 AKNAQ7Z591 1439 aa1.82□□□□□ -2.12
PSPC1-205ENST00000497722 IGLV1-36A0A0B4J1U3 117 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 A0A0U1RQV1 116 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 C5orf63A6NC05 138 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 CDH16O75309 829 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 IGKV4-1P06312 121 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 SERPINE2P07093 398 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 MYL9P24844 172 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 OTX1P32242 354 aaPredicted RBP1.81□□□□□ -2.12
PSPC1-205ENST00000497722 RPL23P62829 140 aaKnown RBP1.81□□□□□ -2.12
PSPC1-205ENST00000497722 RPS15P62841 145 aaKnown RBP1.81□□□□□ -2.12
PSPC1-205ENST00000497722 LRRC74AQ0VAA2 488 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 KIR2DS1Q14954 304 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 YIF1BQ5BJH7 314 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 PRR9Q5T870 116 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 LRRC66Q68CR7 880 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 TMEM205Q6UW68 189 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 MDP1Q86V88 176 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 GTPBP8Q8N3Z3 284 aaPredicted RBP1.81□□□□□ -2.12
PSPC1-205ENST00000497722 GATSQ8NAP1 163 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 OR4C5Q8NGB2 326 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 OR10AD1Q8NGE0 317 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 OR1J4Q8NGS1 313 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 OR10G6Q8NH81 332 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 OR5K2Q8NHB8 316 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 ESR2Q92731 530 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 DUS3LQ96G46 650 aaKnown RBP1.81□□□□□ -2.12
PSPC1-205ENST00000497722 MYCBPQ99417 103 aaPredicted RBP1.81□□□□□ -2.12
PSPC1-205ENST00000497722 OSBPL11Q9BXB4 747 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 ACTR3CQ9C0K3 210 aaPredicted RBP1.81□□□□□ -2.12
PSPC1-205ENST00000497722 TMEM185BQ9H7F4 350 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 EXOSC4Q9NPD3 245 aaKnown RBP1.81□□□□□ -2.12
PSPC1-205ENST00000497722 RHBDL2Q9NX52 303 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 SLC17A4Q9Y2C5 497 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 PTPRTO14522 1441 aa1.81□□□□□ -2.12
PSPC1-205ENST00000497722 SMIM26A0A096LP01 95 aa1.8□□□□□ -2.12
PSPC1-205ENST00000497722 IGHV1-69DA0A0B4J2H0 117 aa1.8□□□□□ -2.12
PSPC1-205ENST00000497722 H0YJW9 148 aa1.8□□□□□ -2.12
PSPC1-205ENST00000497722 H7C1H1 209 aa1.8□□□□□ -2.12
PSPC1-205ENST00000497722 DNASE2O00115 360 aaPredicted RBP1.8□□□□□ -2.12
PSPC1-205ENST00000497722 SCAMP2O15127 329 aaKnown RBP1.8□□□□□ -2.12
PSPC1-205ENST00000497722 CHST1O43916 411 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms