RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 MICU1Q9BPX6 476 aa1.74□□□□□ -2.13
CD46-218ENST00000496723 C1orf198Q9H425 327 aa1.74□□□□□ -2.13
CD46-218ENST00000496723 SLC38A10Q9HBR0 1119 aa1.74□□□□□ -2.13
CD46-218ENST00000496723 ZNF160Q9HCG1 818 aa1.74□□□□□ -2.13
CD46-218ENST00000496723 TMEM9BQ9NQ34 198 aa1.74□□□□□ -2.13
CD46-218ENST00000496723 ZNF229Q9UJW7 825 aa1.74□□□□□ -2.13
CD46-218ENST00000496723 KCNE3Q9Y6H6 103 aa1.74□□□□□ -2.13
CD46-218ENST00000496723 C5orf63A6NC05 138 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 EIF4E2O60573 245 aaKnown RBP1.73□□□□□ -2.13
CD46-218ENST00000496723 HUS1O60921 280 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 TPM2P07951 284 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 ZNF688P0C7X2 276 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 RAB3AP20336 220 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 MRPL19P49406 292 aaKnown RBP1.73□□□□□ -2.13
CD46-218ENST00000496723 RPS15P62841 145 aaKnown RBP1.73□□□□□ -2.13
CD46-218ENST00000496723 BEX3Q00994 111 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 LIPEQ05469 1076 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 MERTKQ12866 999 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 CHRNA6Q15825 494 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 PSMD5Q16401 504 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 PGGHGQ32M88 737 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 SOHLH1Q5JUK2 328 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 AVPI1Q5T686 147 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 UBE2UQ5VVX9 321 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 SSX9Q7RTT3 188 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 SCD5Q86SK9 330 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 TSEN15Q8WW01 171 aaKnown RBP1.73□□□□□ -2.13
CD46-218ENST00000496723 TMEM230Q96A57 120 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 DUS3LQ96G46 650 aaKnown RBP1.73□□□□□ -2.13
CD46-218ENST00000496723 VPS37BQ9H9H4 285 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 LYARQ9NX58 379 aaKnown RBP1.73□□□□□ -2.13
CD46-218ENST00000496723 DCAF16Q9NXF7 216 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 VANGL2Q9ULK5 521 aa1.73□□□□□ -2.13
CD46-218ENST00000496723 NSD2O96028 1365 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 DHX57Q6P158 1386 aaKnown RBP1.72□□□□□ -2.13
CD46-218ENST00000496723 SHROOM3Q8TF72 1996 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 TSPOAP1O95153 1857 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 BRCA1P38398 1863 aaKnown RBP1.72□□□□□ -2.13
CD46-218ENST00000496723 TRBV9A0A0B4J1U6 114 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 CENPVL3A0A0U1RRI6 287 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 SMKR1H3BMG3 65 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 L7N2F9 121 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 RDH16O75452 317 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 CLDN11O75508 207 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 OR2F2O95006 317 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 CCNB2O95067 398 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 SERPINE2P07093 398 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 CT45A6P0DMU7 189 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 CT45A5P0DMU8 189 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 CT45A7P0DMV0 189 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 GGT1P19440 569 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 BCKDHBP21953 392 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 HMOX2P30519 316 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 UQCRFS1P47985 274 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 HCAR3P49019 387 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 P2RX1P51575 399 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 SP4Q02446 784 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 SELENBP1Q13228 472 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 TRAM2Q15035 370 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 MPV17L2Q567V2 206 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 CT45A1Q5HYN5 189 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 NPSR1Q6W5P4 371 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 MBOAT1Q6ZNC8 495 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 EIF3MQ7L2H7 374 aaKnown RBP1.72□□□□□ -2.13
CD46-218ENST00000496723 GABRG1Q8N1C3 465 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 TMEM256Q8N2U0 113 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 TMEM105Q8N8V8 129 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 TTC29Q8NA56 475 aaPredicted RBP1.72□□□□□ -2.13
CD46-218ENST00000496723 ST20-AS1Q8NBB2 130 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 CT45A3Q8NHU0 189 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 LYPD6BQ8NI32 183 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 C8orf44Q96CB5 159 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 HSD17B10Q99714 261 aaKnown RBP1.72□□□□□ -2.13
CD46-218ENST00000496723 FGF23Q9GZV9 251 aaPredicted RBP1.72□□□□□ -2.13
CD46-218ENST00000496723 EDA2RQ9HAV5 297 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 TMEM165Q9HC07 324 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 C20orf96Q9NUD7 363 aaPredicted RBP1.72□□□□□ -2.13
CD46-218ENST00000496723 GCNT4Q9P109 453 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 CRCT1Q9UGL9 99 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 SLC17A4Q9Y2C5 497 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 C2orf16Q68DN1 1984 aa1.72□□□□□ -2.13
CD46-218ENST00000496723 FBN1P35555 2871 aaKnown RBP1.71□□□□□ -2.14
CD46-218ENST00000496723 ADGRL1O94910 1474 aa1.71□□□□□ -2.14
CD46-218ENST00000496723 COL22A1Q8NFW1 1626 aaPredicted RBP1.71□□□□□ -2.14
CD46-218ENST00000496723 TRAV6A0A075B6T7 132 aa1.71□□□□□ -2.14
CD46-218ENST00000496723 IGLV1-36A0A0B4J1U3 117 aa1.71□□□□□ -2.14
CD46-218ENST00000496723 OR2AG2A6NM03 316 aa1.71□□□□□ -2.14
CD46-218ENST00000496723 VGLL3A8MV65 326 aa1.71□□□□□ -2.14
CD46-218ENST00000496723 POLR1CO15160 346 aaPredicted RBP1.71□□□□□ -2.14
CD46-218ENST00000496723 EIF3HO15372 352 aaKnown RBP eCLIP1.71□□□□□ -2.14
CD46-218ENST00000496723 CHST10O43529 356 aa1.71□□□□□ -2.14
CD46-218ENST00000496723 REM1O75628 298 aa1.71□□□□□ -2.14
CD46-218ENST00000496723 ARG1P05089 322 aa1.71□□□□□ -2.14
CD46-218ENST00000496723 ERCC1P07992 297 aaPredicted RBP1.71□□□□□ -2.14
CD46-218ENST00000496723 ERGP11308 486 aa1.71□□□□□ -2.14
CD46-218ENST00000496723 ME2P23368 584 aa1.71□□□□□ -2.14
CD46-218ENST00000496723 COL8A2P25067 703 aa1.71□□□□□ -2.14
CD46-218ENST00000496723 CDKN2DP55273 166 aa1.71□□□□□ -2.14
CD46-218ENST00000496723 TAS2R31P59538 309 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms