RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 NSMCE2Q96MF7 247 aa10.89□□□□□ -0.67
FN1-226ENST00000496542 PITX2Q99697 317 aa10.89□□□□□ -0.67
FN1-226ENST00000496542 FN3KQ9H479 309 aa10.89□□□□□ -0.67
FN1-226ENST00000496542 GCM1Q9NP62 436 aa10.89□□□□□ -0.67
FN1-226ENST00000496542 ESM1Q9NQ30 184 aa10.89□□□□□ -0.67
FN1-226ENST00000496542 OR5V1Q9UGF6 321 aa10.89□□□□□ -0.67
FN1-226ENST00000496542 TMCC3Q9ULS5 477 aa10.89□□□□□ -0.67
FN1-226ENST00000496542 CEACAM18A8MTB9 384 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 F5H0A9 414 aaPredicted RBP10.88□□□□□ -0.67
FN1-226ENST00000496542 F5H5P2 479 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 TRAPPC2LH3BP13 241 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 ARPC3O15145 178 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 SNX3O60493 162 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 CYB5R3P00387 301 aaPredicted RBP10.88□□□□□ -0.67
FN1-226ENST00000496542 HLA-DQA2P01906 255 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 FABP3P05413 133 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 HSD17B1P14061 328 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 ZNF12P17014 697 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 RRM2P31350 389 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 IFNGR2P38484 337 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 SLC6A9P48067 706 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 SRP9P49458 86 aaKnown RBP10.88□□□□□ -0.67
FN1-226ENST00000496542 ZNF154Q13106 437 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 SLC36A3Q495N2 470 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 ESCO2Q56NI9 601 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 SAMD4BQ5PRF9 694 aaKnown RBP10.88□□□□□ -0.67
FN1-226ENST00000496542 SLC18B1Q6NT16 456 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 CPLX4Q7Z7G2 160 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 MOGAT3Q86VF5 341 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 C3orf56Q8N813 242 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 SDR9C7Q8NEX9 313 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 SLC26A10Q8NG04 563 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 DVL3Q92997 716 aaPredicted RBP10.88□□□□□ -0.67
FN1-226ENST00000496542 POP5Q969H6 163 aaKnown RBP10.88□□□□□ -0.67
FN1-226ENST00000496542 MRI1Q9BV20 369 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 HCAR1Q9BXC0 346 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 PPIAL4AQ9Y536 164 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 AUP1Q9Y679 476 aa10.88□□□□□ -0.67
FN1-226ENST00000496542 TMEM89A2RUT3 159 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 A8MXK9 166 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 IQCF6A8MYZ5 107 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 F5H5K5 113 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 IFNL4K9M1U5 179 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 MLNRO43193 412 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 ACSM4P0C7M7 580 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 RPS2P15880 293 aaKnown RBP10.87□□□□□ -0.67
FN1-226ENST00000496542 GSSP48637 474 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 COMPP49747 757 aaPredicted RBP10.87□□□□□ -0.67
FN1-226ENST00000496542 UBA52P62987 128 aaKnown RBP10.87□□□□□ -0.67
FN1-226ENST00000496542 TRAP1Q12931 704 aaKnown RBP10.87□□□□□ -0.67
FN1-226ENST00000496542 RSPO1Q2MKA7 263 aaPredicted RBP10.87□□□□□ -0.67
FN1-226ENST00000496542 CLEC12AQ5QGZ9 265 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 SLC35F1Q5T1Q4 408 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 RBMS3Q6XE24 437 aaKnown RBP10.87□□□□□ -0.67
FN1-226ENST00000496542 ZNF620Q6ZNG0 422 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 PGAM4Q8N0Y7 254 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 SIGLECL1Q8N7X8 197 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 ZDHHC22Q8N966 263 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 OR2AJ1Q8NGZ0 328 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 GNPDA2Q8TDQ7 276 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 CDRT15Q96T59 188 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 ATF6BQ99941 703 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 SLC30A2Q9BRI3 323 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 CDADC1Q9BWV3 514 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 PLA2G12AQ9BZM1 189 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 ZNF69Q9UC07 566 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 LRCH1Q9Y2L9 728 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 POLR3KQ9Y2Y1 108 aaPredicted RBP10.87□□□□□ -0.67
FN1-226ENST00000496542 INSIG2Q9Y5U4 225 aa10.87□□□□□ -0.67
FN1-226ENST00000496542 OR6C68A6NDL8 312 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 LRRC30A6NM36 301 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 LCATP04180 440 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 HLA-DPB1P04440 258 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 SELEP16581 610 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 PYCR1P32322 319 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 MXRA7P84157 204 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.86□□□□□ -0.67
FN1-226ENST00000496542 TSPAN31Q12999 210 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 ECH1Q13011 328 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 KRTAP27-1Q3LI81 207 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 PGBD2Q6P3X8 592 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 ZBTB46Q86UZ6 589 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 ZDHHC21Q8IVQ6 265 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 OR52E2Q8NGJ4 325 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 DUX5Q96PT3 197 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 SSBP3Q9BWW4 388 aaPredicted RBP10.86□□□□□ -0.67
FN1-226ENST00000496542 C1QTNF5Q9BXJ0 243 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 EGLN3Q9H6Z9 239 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 NTN4Q9HB63 628 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 DDX28Q9NUL7 540 aaKnown RBP10.86□□□□□ -0.67
FN1-226ENST00000496542 TMEM100Q9NV29 134 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 ARL8BQ9NVJ2 186 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 CD300AQ9UGN4 299 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 CYB5R1Q9UHQ9 305 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 TAGLN3Q9UI15 199 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 NUP50Q9UKX7 468 aa10.86□□□□□ -0.67
FN1-226ENST00000496542 IDH3BO43837 385 aa10.85□□□□□ -0.67
FN1-226ENST00000496542 WNT2P09544 360 aa10.85□□□□□ -0.67
FN1-226ENST00000496542 GGT2P36268 569 aa10.85□□□□□ -0.67
FN1-226ENST00000496542 RPS27P42677 84 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 248.9 ms