RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 ZNF81P51508 661 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 TPTEP56180 551 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 HIST1H3AP68431 136 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 TAF13Q15543 124 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 ZIK1Q3SY52 487 aaPredicted RBP14.02□□□□□ -0.17
SF3A1-209ENST00000496189 TEX30Q5JUR7 227 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 HIST2H3PS2Q5TEC6 136 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 SLC18B1Q6NT16 456 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 HIST2H3AQ71DI3 136 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 SHFQ7M4L6 423 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 GID4Q8IVV7 300 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 ZNF786Q8N393 782 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 ZNF511Q8NB15 262 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 OR8J1Q8NGP2 316 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 TRUB1Q8WWH5 349 aaKnown RBP14.02□□□□□ -0.17
SF3A1-209ENST00000496189 HRASLS5Q96KN8 279 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 DIRC2Q96SL1 478 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 SLC29A1Q99808 456 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 HCAR1Q9BXC0 346 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 VCXQ9H320 206 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 TOR3AQ9H497 397 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 GSX1Q9H4S2 264 aaPredicted RBP14.02□□□□□ -0.17
SF3A1-209ENST00000496189 COMMD3-BMI1R4GMX3 469 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 TEP1Q99973 2627 aaKnown RBP14.02□□□□□ -0.17
SF3A1-209ENST00000496189 USF1P22415 310 aaPredicted RBP14.01□□□□□ -0.17
SF3A1-209ENST00000496189 RIPPLY3P57055 190 aa14.01□□□□□ -0.17
SF3A1-209ENST00000496189 DBPQ10586 325 aaPredicted RBP14.01□□□□□ -0.17
SF3A1-209ENST00000496189 MALLQ13021 153 aa14.01□□□□□ -0.17
SF3A1-209ENST00000496189 APOFQ13790 326 aa14.01□□□□□ -0.17
SF3A1-209ENST00000496189 LRRC36Q1X8D7 754 aa14.01□□□□□ -0.17
SF3A1-209ENST00000496189 FAM209AQ5JX71 171 aa14.01□□□□□ -0.17
SF3A1-209ENST00000496189 LINC01590Q5TEZ4 76 aa14.01□□□□□ -0.17
SF3A1-209ENST00000496189 NXNL2Q5VZ03 156 aa14.01□□□□□ -0.17
SF3A1-209ENST00000496189 ERI1Q8IV48 349 aaKnown RBP14.01□□□□□ -0.17
SF3A1-209ENST00000496189 GALNT4Q8N4A0 578 aa14.01□□□□□ -0.17
SF3A1-209ENST00000496189 ZNF555Q8NEP9 628 aa14.01□□□□□ -0.17
SF3A1-209ENST00000496189 ZNRF4Q8WWF5 429 aa14.01□□□□□ -0.17
SF3A1-209ENST00000496189 SLC7A6Q92536 515 aa14.01□□□□□ -0.17
SF3A1-209ENST00000496189 RDH5Q92781 318 aa14.01□□□□□ -0.17
SF3A1-209ENST00000496189 ZMYND19Q96E35 227 aaPredicted RBP14.01□□□□□ -0.17
SF3A1-209ENST00000496189 IL4I1Q96RQ9 567 aa14.01□□□□□ -0.17
SF3A1-209ENST00000496189 SMR3AQ99954 134 aa14.01□□□□□ -0.17
SF3A1-209ENST00000496189 EGLN1Q9GZT9 426 aa14.01□□□□□ -0.17
SF3A1-209ENST00000496189 WDR76Q9H967 626 aa14.01□□□□□ -0.17
SF3A1-209ENST00000496189 SMPD3Q9NY59 655 aaPredicted RBP14.01□□□□□ -0.17
SF3A1-209ENST00000496189 NKIRAS2Q9NYR9 191 aa14.01□□□□□ -0.17
SF3A1-209ENST00000496189 ZDHHC8Q9ULC8 765 aa14.01□□□□□ -0.17
SF3A1-209ENST00000496189 SLC22A31A6NKX4 558 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 F5H5K5 113 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 LY6G6DO95868 133 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 TNFSF4P23510 183 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 MPV17P39210 176 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 NR4A2P43354 598 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 SLC15A1P46059 708 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 SLC6A9P48067 706 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 CCL8P80075 99 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 EFNB1P98172 346 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 SLC34A1Q06495 639 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 LOXL1Q08397 574 aaPredicted RBP14□□□□□ -0.17
SF3A1-209ENST00000496189 GGTLC2Q14390 218 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 PCK2Q16822 640 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 CFAP77Q6ZQR2 320 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 DCXRQ7Z4W1 244 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 ZNF454Q8N9F8 522 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 MAPK1IP1LQ8NDC0 245 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 OR6N2Q8NGY6 317 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 FAM81AQ8TBF8 368 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 RFKQ969G6 155 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 TEAD3Q99594 435 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 COPS4Q9BT78 406 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 MARCH7Q9H992 704 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 CHODLQ9H9P2 273 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 SAP30LQ9HAJ7 183 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 STARD10Q9Y365 291 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 GMPPBQ9Y5P6 360 aa14□□□□□ -0.17
SF3A1-209ENST00000496189 ZNF469Q96JG9 3925 aaPredicted RBP13.99□□□□□ -0.17
SF3A1-209ENST00000496189 ZNF878C9JN71 531 aa13.99□□□□□ -0.17
SF3A1-209ENST00000496189 CASQ2O14958 399 aaPredicted RBP13.99□□□□□ -0.17
SF3A1-209ENST00000496189 MPZL2O60487 215 aa13.99□□□□□ -0.17
SF3A1-209ENST00000496189 DBHP09172 617 aa13.99□□□□□ -0.17
SF3A1-209ENST00000496189 RAC2P15153 192 aa13.99□□□□□ -0.17
SF3A1-209ENST00000496189 SELEP16581 610 aa13.99□□□□□ -0.17
SF3A1-209ENST00000496189 ACHEP22303 614 aa13.99□□□□□ -0.17
SF3A1-209ENST00000496189 SLC2A5P22732 501 aa13.99□□□□□ -0.17
SF3A1-209ENST00000496189 PEX2P28328 305 aa13.99□□□□□ -0.17
SF3A1-209ENST00000496189 MRPS11P82912 194 aaKnown RBP13.99□□□□□ -0.17
SF3A1-209ENST00000496189 LPCAT4Q643R3 524 aa13.99□□□□□ -0.17
SF3A1-209ENST00000496189 LYPD4Q6UWN0 246 aa13.99□□□□□ -0.17
SF3A1-209ENST00000496189 Q71RC1 249 aaPredicted RBP13.99□□□□□ -0.17
SF3A1-209ENST00000496189 MEPCEQ7L2J0 689 aaKnown RBP13.99□□□□□ -0.17
SF3A1-209ENST00000496189 BBS1Q8NFJ9 593 aa13.99□□□□□ -0.17
SF3A1-209ENST00000496189 SP140LQ9H930 580 aa13.99□□□□□ -0.17
SF3A1-209ENST00000496189 CENPMQ9NSP4 180 aa13.99□□□□□ -0.17
SF3A1-209ENST00000496189 PTTG3PQ9NZH4 202 aa13.99□□□□□ -0.17
SF3A1-209ENST00000496189 ACANP16112 2415 aa13.99□□□□□ -0.17
SF3A1-209ENST00000496189 LOC100130705A0A1B0GUX0 176 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 SNTNA6NMZ2 147 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 M0R129 80 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 M0R135 149 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 SPRY3O43610 288 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms