RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 TMED1Q13445 227 aa17.2■□□□□ 0.34
LMO4-204ENST00000495705 RSPO1Q2MKA7 263 aaPredicted RBP17.2■□□□□ 0.34
LMO4-204ENST00000495705 SPATA46Q5T0L3 261 aa17.2■□□□□ 0.34
LMO4-204ENST00000495705 MBNL2Q5VZF2 373 aaKnown RBP17.2■□□□□ 0.34
LMO4-204ENST00000495705 PRSS57Q6UWY2 283 aa17.2■□□□□ 0.34
LMO4-204ENST00000495705 COLCA1Q6ZS62 124 aa17.2■□□□□ 0.34
LMO4-204ENST00000495705 LRP11Q86VZ4 500 aa17.2■□□□□ 0.34
LMO4-204ENST00000495705 ZNF555Q8NEP9 628 aa17.2■□□□□ 0.34
LMO4-204ENST00000495705 KLF14Q8TD94 323 aaPredicted RBP17.2■□□□□ 0.34
LMO4-204ENST00000495705 ZNF799Q96GE5 643 aa17.2■□□□□ 0.34
LMO4-204ENST00000495705 KCNJ15Q99712 375 aa17.2■□□□□ 0.34
LMO4-204ENST00000495705 C1QTNF5Q9BXJ0 243 aa17.2■□□□□ 0.34
LMO4-204ENST00000495705 VCXQ9H320 206 aa17.2■□□□□ 0.34
LMO4-204ENST00000495705 FAM118AQ9NWS6 357 aa17.2■□□□□ 0.34
LMO4-204ENST00000495705 LAMP5Q9UJQ1 280 aa17.2■□□□□ 0.34
LMO4-204ENST00000495705 TMEM14AQ9Y6G1 99 aa17.2■□□□□ 0.34
LMO4-204ENST00000495705 MPZL2O60487 215 aa17.19■□□□□ 0.34
LMO4-204ENST00000495705 IGHV3-13P01766 116 aa17.19■□□□□ 0.34
LMO4-204ENST00000495705 HTR1FP30939 366 aa17.19■□□□□ 0.34
LMO4-204ENST00000495705 SLC34A1Q06495 639 aa17.19■□□□□ 0.34
LMO4-204ENST00000495705 POU4F2Q12837 409 aa17.19■□□□□ 0.34
LMO4-204ENST00000495705 Q5PR19 223 aa17.19■□□□□ 0.34
LMO4-204ENST00000495705 SLC25A30Q5SVS4 291 aa17.19■□□□□ 0.34
LMO4-204ENST00000495705 MEDAGQ5VYS4 303 aa17.19■□□□□ 0.34
LMO4-204ENST00000495705 DRAM2Q6UX65 266 aa17.19■□□□□ 0.34
LMO4-204ENST00000495705 ZNF771Q7L3S4 317 aaPredicted RBP17.19■□□□□ 0.34
LMO4-204ENST00000495705 THEM6Q8WUY1 208 aa17.19■□□□□ 0.34
LMO4-204ENST00000495705 ZNF582Q96NG8 517 aaPredicted RBP17.19■□□□□ 0.34
LMO4-204ENST00000495705 MNTQ99583 582 aa17.19■□□□□ 0.34
LMO4-204ENST00000495705 MS4A5Q9H3V2 200 aa17.19■□□□□ 0.34
LMO4-204ENST00000495705 RNPEPL1Q9HAU8 725 aa17.19■□□□□ 0.34
LMO4-204ENST00000495705 DNAJC27Q9NZQ0 273 aa17.19■□□□□ 0.34
LMO4-204ENST00000495705 STARD10Q9Y365 291 aa17.19■□□□□ 0.34
LMO4-204ENST00000495705 DLGAP1O14490 977 aa17.18■□□□□ 0.34
LMO4-204ENST00000495705 CLPTM1O96005 669 aa17.18■□□□□ 0.34
LMO4-204ENST00000495705 IGHV4-39P01824 125 aa17.18■□□□□ 0.34
LMO4-204ENST00000495705 APOC1P02654 83 aa17.18■□□□□ 0.34
LMO4-204ENST00000495705 ERCC1P07992 297 aaPredicted RBP17.18■□□□□ 0.34
LMO4-204ENST00000495705 MRPL3P09001 348 aaKnown RBP17.18■□□□□ 0.34
LMO4-204ENST00000495705 ALOX5APP20292 161 aa17.18■□□□□ 0.34
LMO4-204ENST00000495705 HSD11B1P28845 292 aa17.18■□□□□ 0.34
LMO4-204ENST00000495705 SLC6A9P48067 706 aa17.18■□□□□ 0.34
LMO4-204ENST00000495705 NKPD1Q17RQ9 610 aa17.18■□□□□ 0.34
LMO4-204ENST00000495705 SPNS3Q6ZMD2 512 aa17.18■□□□□ 0.34
LMO4-204ENST00000495705 SNX33Q8WV41 574 aa17.18■□□□□ 0.34
LMO4-204ENST00000495705 VRK1Q99986 396 aaPredicted RBP17.18■□□□□ 0.34
LMO4-204ENST00000495705 RAB1BQ9H0U4 201 aa17.18■□□□□ 0.34
LMO4-204ENST00000495705 TAAR3PQ9P1P4 343 aa17.18■□□□□ 0.34
LMO4-204ENST00000495705 MYEF2Q9P2K5 600 aaKnown RBP17.18■□□□□ 0.34
LMO4-204ENST00000495705 NKX1-2Q9UD57 310 aaPredicted RBP17.18■□□□□ 0.34
LMO4-204ENST00000495705 CGGBP1Q9UFW8 167 aaPredicted RBP17.18■□□□□ 0.34
LMO4-204ENST00000495705 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.18■□□□□ 0.34
LMO4-204ENST00000495705 AKAP9Q99996 3911 aa17.17■□□□□ 0.34
LMO4-204ENST00000495705 ITPR3Q14573 2671 aa17.17■□□□□ 0.34
LMO4-204ENST00000495705 SNTNA6NMZ2 147 aa17.17■□□□□ 0.34
LMO4-204ENST00000495705 MT-ND5P03915 603 aa17.17■□□□□ 0.34
LMO4-204ENST00000495705 LCATP04180 440 aa17.17■□□□□ 0.34
LMO4-204ENST00000495705 H2BFMP0C1H6 154 aa17.17■□□□□ 0.34
LMO4-204ENST00000495705 MPV17P39210 176 aa17.17■□□□□ 0.34
LMO4-204ENST00000495705 OPRL1P41146 370 aa17.17■□□□□ 0.34
LMO4-204ENST00000495705 EFNA4P52798 201 aa17.17■□□□□ 0.34
LMO4-204ENST00000495705 OCLNQ16625 522 aa17.17■□□□□ 0.34
LMO4-204ENST00000495705 KCTD18Q6PI47 426 aaPredicted RBP17.17■□□□□ 0.34
LMO4-204ENST00000495705 SPATC1Q76KD6 591 aa17.17■□□□□ 0.34
LMO4-204ENST00000495705 ZNF283Q8N7M2 679 aa17.17■□□□□ 0.34
LMO4-204ENST00000495705 ASB17Q8WXJ9 295 aa17.17■□□□□ 0.34
LMO4-204ENST00000495705 AMELYQ99218 206 aa17.17■□□□□ 0.34
LMO4-204ENST00000495705 APOL4Q9BPW4 351 aa17.17■□□□□ 0.34
LMO4-204ENST00000495705 SP140LQ9H930 580 aa17.17■□□□□ 0.34
LMO4-204ENST00000495705 ADGRL4Q9HBW9 690 aa17.17■□□□□ 0.34
LMO4-204ENST00000495705 MAP1AP78559 2803 aaPredicted RBP17.17■□□□□ 0.34
LMO4-204ENST00000495705 PHYHO14832 338 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 NDUFS7O75251 213 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 ADRA2AP08913 450 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 SBK2P0C263 348 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 ALDH3B1P43353 468 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 PRKXP51817 358 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 MALLQ13021 153 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 MAD2L1BPQ15013 274 aaPredicted RBP17.16■□□□□ 0.34
LMO4-204ENST00000495705 TTC23Q5W5X9 447 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 FBXW12Q6X9E4 464 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.16■□□□□ 0.34
LMO4-204ENST00000495705 KRTAP1-3Q8IUG1 177 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 SLC35F2Q8IXU6 374 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 ENTHD1Q8IYW4 607 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 OR51G2Q8NGK0 314 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 UBE2FQ969M7 185 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 SORCS2Q96PQ0 1159 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 POFUT1Q9H488 388 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 NIPAL2Q9H841 368 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 CLN6Q9NWW5 311 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 KLHDC2Q9Y2U9 406 aa17.16■□□□□ 0.34
LMO4-204ENST00000495705 RAC2P15153 192 aa17.15■□□□□ 0.34
LMO4-204ENST00000495705 LIPAP38571 399 aa17.15■□□□□ 0.34
LMO4-204ENST00000495705 ZMAT1Q5H9K5 638 aa17.15■□□□□ 0.34
LMO4-204ENST00000495705 DEGS2Q6QHC5 323 aa17.15■□□□□ 0.34
LMO4-204ENST00000495705 KRT77Q7Z794 578 aa17.15■□□□□ 0.34
LMO4-204ENST00000495705 DHRSXQ8N5I4 330 aa17.15■□□□□ 0.34
LMO4-204ENST00000495705 NEU4Q8WWR8 484 aaPredicted RBP17.15■□□□□ 0.34
LMO4-204ENST00000495705 Q96MT0 163 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms