RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 EVX1P49640 407 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 ISL1P61371 349 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 PPP1CBP62140 327 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 SNRPD2P62316 118 aaKnown RBP14.73□□□□□ -0.05
HDAC6-235ENST00000495515 ACTC1P68032 377 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 ACTA1P68133 377 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 EFNB3Q15768 340 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 MOGQ16653 247 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 RFPL4BQ6ZWI9 263 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 THAP5Q7Z6K1 395 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 ZNF283Q8N7M2 679 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 OR10H4Q8NGA5 316 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 MRPL24Q96A35 216 aaKnown RBP14.73□□□□□ -0.05
HDAC6-235ENST00000495515 LIME1Q9H400 295 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 AASSQ9UDR5 926 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 GPR160Q9UJ42 338 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 PLEKHA6Q9Y2H5 1048 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 ABCA12Q86UK0 2595 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 ITPR2Q14571 2701 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 CELSR2Q9HCU4 2923 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 IRGMA1A4Y4 181 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 ATE1O95260 518 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 FADS2O95864 444 aaKnown RBP14.72□□□□□ -0.05
HDAC6-235ENST00000495515 NGFP01138 241 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 LCATP04180 440 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 SOD3P08294 240 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 DBTP11182 482 aaKnown RBP14.72□□□□□ -0.05
HDAC6-235ENST00000495515 PRKXP51817 358 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 HCCSP53701 268 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 CXCR4P61073 352 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 ZNF91Q05481 1191 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 EGR3Q06889 387 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 MALLQ13021 153 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 RSPO1Q2MKA7 263 aaPredicted RBP14.72□□□□□ -0.05
HDAC6-235ENST00000495515 KLHL22Q53GT1 634 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 C6orf52Q5T4I8 152 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 ZNF322Q6U7Q0 402 aaPredicted RBP14.72□□□□□ -0.05
HDAC6-235ENST00000495515 USP51Q70EK9 711 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 SYNPRQ8TBG9 265 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 APH1BQ8WW43 257 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 AMELYQ99218 206 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 TRAF4Q9BUZ4 470 aaPredicted RBP14.72□□□□□ -0.05
HDAC6-235ENST00000495515 C1QTNF5Q9BXJ0 243 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 DUSP13Q9UII6 198 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 IKZF2Q9UKS7 526 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 KLHDC2Q9Y2U9 406 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 PMF1-BGLAPU3KQ54 211 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 ROS1P08922 2347 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 HEATR1Q9H583 2144 aaKnown RBP14.72□□□□□ -0.05
HDAC6-235ENST00000495515 CRYBG3Q68DQ2 2970 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 CREBBPQ92793 2442 aa14.72□□□□□ -0.05
HDAC6-235ENST00000495515 WBP4O75554 376 aaKnown RBP14.71□□□□□ -0.05
HDAC6-235ENST00000495515 APOL3O95236 402 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 GNAO1P09471 354 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 ZNF250P15622 560 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 CD53P19397 219 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 CX3CR1P49238 355 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 KLF3P57682 345 aaPredicted RBP14.71□□□□□ -0.05
HDAC6-235ENST00000495515 ROM1Q03395 351 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 RAB40BQ12829 278 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 SNCBQ16143 134 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 LRRN1Q6UXK5 716 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 COLCA1Q6ZS62 124 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 ZNF679Q8IYX0 411 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 CNIH3Q8TBE1 160 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 SLC25A40Q8TBP6 338 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 MRPL48Q96GC5 212 aaKnown RBP14.71□□□□□ -0.05
HDAC6-235ENST00000495515 OR8B4Q96RC9 309 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 DOK1Q99704 481 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 OR2J1Q9GZK6 312 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 AMBNQ9NP70 447 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 SLCO1C1Q9NYB5 712 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 COPS3Q9UNS2 423 aa14.71□□□□□ -0.05
HDAC6-235ENST00000495515 A0A1W2PPW3 197 aa14.7□□□□□ -0.06
HDAC6-235ENST00000495515 KRT8P05787 483 aa14.7□□□□□ -0.06
HDAC6-235ENST00000495515 ANXA2P07355 339 aaKnown RBP14.7□□□□□ -0.06
HDAC6-235ENST00000495515 DCTDP32321 178 aa14.7□□□□□ -0.06
HDAC6-235ENST00000495515 RIDAP52758 137 aaKnown RBP14.7□□□□□ -0.06
HDAC6-235ENST00000495515 ERVS71-1P61550 626 aa14.7□□□□□ -0.06
HDAC6-235ENST00000495515 CDK5R2Q13319 367 aa14.7□□□□□ -0.06
HDAC6-235ENST00000495515 SPATA46Q5T0L3 261 aa14.7□□□□□ -0.06
HDAC6-235ENST00000495515 MBNL2Q5VZF2 373 aaKnown RBP14.7□□□□□ -0.06
HDAC6-235ENST00000495515 ACBD7Q8N6N7 88 aa14.7□□□□□ -0.06
HDAC6-235ENST00000495515 OR52H1Q8NGJ2 320 aa14.7□□□□□ -0.06
HDAC6-235ENST00000495515 KLF14Q8TD94 323 aaPredicted RBP14.7□□□□□ -0.06
HDAC6-235ENST00000495515 SNX33Q8WV41 574 aa14.7□□□□□ -0.06
HDAC6-235ENST00000495515 MBD6Q96DN6 1003 aa14.7□□□□□ -0.06
HDAC6-235ENST00000495515 LGALS12Q96DT0 336 aa14.7□□□□□ -0.06
HDAC6-235ENST00000495515 MARS2Q96GW9 593 aaKnown RBP14.7□□□□□ -0.06
HDAC6-235ENST00000495515 TBX5Q99593 518 aa14.7□□□□□ -0.06
HDAC6-235ENST00000495515 MRPL37Q9BZE1 423 aaKnown RBP14.7□□□□□ -0.06
HDAC6-235ENST00000495515 MRPS18AQ9NVS2 196 aaKnown RBP14.7□□□□□ -0.06
HDAC6-235ENST00000495515 BEX4Q9NWD9 120 aaPredicted RBP14.7□□□□□ -0.06
HDAC6-235ENST00000495515 RAB26Q9ULW5 256 aa14.7□□□□□ -0.06
HDAC6-235ENST00000495515 EXOGQ9Y2C4 368 aaKnown RBP14.7□□□□□ -0.06
HDAC6-235ENST00000495515 STARD10Q9Y365 291 aa14.7□□□□□ -0.06
HDAC6-235ENST00000495515 A0A1W2PQL4 384 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-235ENST00000495515 DAPL1A0PJW8 107 aa14.69□□□□□ -0.06
HDAC6-235ENST00000495515 CD8AP01732 235 aa14.69□□□□□ -0.06
HDAC6-235ENST00000495515 MT-ND5P03915 603 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms