RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 C4orf17Q53FE4 359 aa14.36□□□□□ -0.11
CBX4-204ENST00000495122 GGNQ86UU5 652 aa14.36□□□□□ -0.11
CBX4-204ENST00000495122 WDFY1Q8IWB7 410 aa14.36□□□□□ -0.11
CBX4-204ENST00000495122 CADM3Q8N126 398 aa14.36□□□□□ -0.11
CBX4-204ENST00000495122 NKAIN3Q8N8D7 197 aa14.36□□□□□ -0.11
CBX4-204ENST00000495122 OR6N1Q8NGY5 312 aa14.36□□□□□ -0.11
CBX4-204ENST00000495122 LGALS14Q8TCE9 139 aa14.36□□□□□ -0.11
CBX4-204ENST00000495122 RFT1Q96AA3 541 aa14.36□□□□□ -0.11
CBX4-204ENST00000495122 GFI1Q99684 422 aa14.36□□□□□ -0.11
CBX4-204ENST00000495122 NELFAQ9H3P2 528 aa14.36□□□□□ -0.11
CBX4-204ENST00000495122 B3GAT2Q9NPZ5 323 aa14.36□□□□□ -0.11
CBX4-204ENST00000495122 RBFOX1Q9NWB1 397 aaKnown RBP14.36□□□□□ -0.11
CBX4-204ENST00000495122 STEAP1Q9UHE8 339 aa14.36□□□□□ -0.11
CBX4-204ENST00000495122 NUFIP1Q9UHK0 495 aaKnown RBP14.36□□□□□ -0.11
CBX4-204ENST00000495122 FOXD3Q9UJU5 478 aaPredicted RBP14.36□□□□□ -0.11
CBX4-204ENST00000495122 GDF2Q9UK05 429 aaPredicted RBP14.36□□□□□ -0.11
CBX4-204ENST00000495122 FREM3P0C091 2139 aa14.36□□□□□ -0.11
CBX4-204ENST00000495122 CACNA1CQ13936 2221 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 PCNX1Q96RV3 2341 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 A0A0G2JMM0 328 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 A0A1W2PPB8 328 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 A0A1W2PRS3 328 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 KIR3DP1A8MWS1 328 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 TNFSF11O14788 317 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 SMAD9O15198 467 aaKnown RBP14.35□□□□□ -0.11
CBX4-204ENST00000495122 CLDN1O95832 211 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 PNPP00491 289 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 SNRPBP14678 240 aaKnown RBP14.35□□□□□ -0.11
CBX4-204ENST00000495122 MAP2K3P46734 347 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 SOX2P48431 317 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 TNFSF10P50591 281 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 MFGE8Q08431 387 aaPredicted RBP14.35□□□□□ -0.11
CBX4-204ENST00000495122 P2RY14Q15391 338 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 OR1C1Q15619 314 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 BCL2A1Q16548 175 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 GLT8D1Q68CQ7 371 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 LRFN4Q6PJG9 635 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 FAM180AQ6UWF9 173 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 NRARPQ7Z6K4 114 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.35□□□□□ -0.11
CBX4-204ENST00000495122 LURAP1LQ8IV03 231 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 C20orf196Q8IYI0 205 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 ELMOD2Q8IZ81 293 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 RDH10Q8IZV5 341 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 ZNF433Q8N7K0 673 aaPredicted RBP14.35□□□□□ -0.11
CBX4-204ENST00000495122 DRAXINQ8NBI3 349 aaPredicted RBP14.35□□□□□ -0.11
CBX4-204ENST00000495122 DUSP18Q8NEJ0 188 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 ENKURQ8TC29 256 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 ASB5Q8WWX0 329 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 DEDD2Q8WXF8 326 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 FOXRED1Q96CU9 486 aaPredicted RBP14.35□□□□□ -0.11
CBX4-204ENST00000495122 FOXN4Q96NZ1 517 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 SLX1AQ9BQ83 275 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 NEURL2Q9BR09 285 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 ZNF703Q9H7S9 590 aaPredicted RBP14.35□□□□□ -0.11
CBX4-204ENST00000495122 DEPPQ9NTK1 212 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 FAM206AQ9NX38 181 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 RHBDL2Q9NX52 303 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 EMC9Q9Y3B6 208 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 LHFPL6Q9Y693 200 aa14.35□□□□□ -0.11
CBX4-204ENST00000495122 A0A0G2JMP0 313 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 A0A0X1KG70 313 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 KLRC4-KLRK1H3BQV0 150 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 EIF1AYO14602 144 aaKnown RBP14.34□□□□□ -0.11
CBX4-204ENST00000495122 DHHO43323 396 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 RAMP1O60894 148 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 PAHP00439 452 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 OPN1LWP04000 364 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 TRAPPC2P0DI81 140 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 TRAPPC2BP0DI82 140 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 IGFBP3P17936 291 aaPredicted RBP14.34□□□□□ -0.11
CBX4-204ENST00000495122 RFX2P48378 723 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 RIPPLY2Q5TAB7 128 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 ZNF324BQ6AW86 544 aaPredicted RBP14.34□□□□□ -0.11
CBX4-204ENST00000495122 YRDCQ86U90 279 aaKnown RBP14.34□□□□□ -0.11
CBX4-204ENST00000495122 LINC00346Q8IVM7 164 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 GJC3Q8NFK1 279 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 OR4M2Q8NGB6 313 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 OR5H6Q8NGV6 325 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 HAS2Q92819 552 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 TMEM45BQ96B21 275 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 S100A16Q96FQ6 103 aaKnown RBP14.34□□□□□ -0.11
CBX4-204ENST00000495122 C11orf54Q9H0W9 315 aaPredicted RBP14.34□□□□□ -0.11
CBX4-204ENST00000495122 SEC61A2Q9H9S3 476 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 LIN7BQ9HAP6 207 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 DDX28Q9NUL7 540 aaKnown RBP14.34□□□□□ -0.11
CBX4-204ENST00000495122 ANKRD10Q9NXR5 420 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 PLA2G3Q9NZ20 509 aa14.34□□□□□ -0.11
CBX4-204ENST00000495122 TRAV17A0A0B4J275 112 aa14.33□□□□□ -0.12
CBX4-204ENST00000495122 LOC107986453A0A1B0GWG9 222 aa14.33□□□□□ -0.12
CBX4-204ENST00000495122 OR6C65A6NJZ3 312 aa14.33□□□□□ -0.12
CBX4-204ENST00000495122 SLC17A2O00624 439 aa14.33□□□□□ -0.12
CBX4-204ENST00000495122 PLA2G10O15496 165 aa14.33□□□□□ -0.12
CBX4-204ENST00000495122 LYRM1O43325 122 aa14.33□□□□□ -0.12
CBX4-204ENST00000495122 NME2P1O60361 137 aa14.33□□□□□ -0.12
CBX4-204ENST00000495122 CYTIPO60759 359 aa14.33□□□□□ -0.12
CBX4-204ENST00000495122 TRAPPC6AO75865 159 aa14.33□□□□□ -0.12
CBX4-204ENST00000495122 ADRA2CP18825 462 aa14.33□□□□□ -0.12
CBX4-204ENST00000495122 NME2P22392 152 aa14.33□□□□□ -0.12
CBX4-204ENST00000495122 HSD11B1P28845 292 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms