RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 KCNG2Q9UJ96 466 aa28.14■■■□□ 2.1
CBX4-203ENST00000494546 GNGT2O14610 69 aa28.13■■■□□ 2.09
CBX4-203ENST00000494546 MSMBP08118 114 aa28.13■■■□□ 2.09
CBX4-203ENST00000494546 RPS27P42677 84 aaKnown RBP28.13■■■□□ 2.09
CBX4-203ENST00000494546 SLC3A1Q07837 685 aa28.13■■■□□ 2.09
CBX4-203ENST00000494546 HNRNPA0Q13151 305 aaKnown RBP28.13■■■□□ 2.09
CBX4-203ENST00000494546 CRMP1Q14194 572 aa28.13■■■□□ 2.09
CBX4-203ENST00000494546 OR2T2Q6IF00 324 aa28.13■■■□□ 2.09
CBX4-203ENST00000494546 LYPD4Q6UWN0 246 aa28.13■■■□□ 2.09
CBX4-203ENST00000494546 FBXW12Q6X9E4 464 aa28.13■■■□□ 2.09
CBX4-203ENST00000494546 TMEM186Q96B77 213 aa28.13■■■□□ 2.09
CBX4-203ENST00000494546 FEVQ99581 238 aa28.13■■■□□ 2.09
CBX4-203ENST00000494546 PNRC2Q9NPJ4 139 aaKnown RBP28.13■■■□□ 2.09
CBX4-203ENST00000494546 HIF1ANQ9NWT6 349 aa28.13■■■□□ 2.09
CBX4-203ENST00000494546 ACSM4P0C7M7 580 aa28.12■■■□□ 2.09
CBX4-203ENST00000494546 PCMT1P22061 227 aa28.12■■■□□ 2.09
CBX4-203ENST00000494546 FLOT2Q14254 428 aa28.12■■■□□ 2.09
CBX4-203ENST00000494546 GK3PQ14409 553 aa28.12■■■□□ 2.09
CBX4-203ENST00000494546 KRTAP27-1Q3LI81 207 aa28.12■■■□□ 2.09
CBX4-203ENST00000494546 CXXC5Q7LFL8 322 aaKnown RBP28.12■■■□□ 2.09
CBX4-203ENST00000494546 SPATA24Q86W54 205 aa28.12■■■□□ 2.09
CBX4-203ENST00000494546 OR51F2Q8NH61 342 aa28.12■■■□□ 2.09
CBX4-203ENST00000494546 MAP6Q96JE9 813 aa28.12■■■□□ 2.09
CBX4-203ENST00000494546 RBM4Q9BWF3 364 aaKnown RBP28.12■■■□□ 2.09
CBX4-203ENST00000494546 WDR76Q9H967 626 aa28.12■■■□□ 2.09
CBX4-203ENST00000494546 ISPDA4D126 451 aa28.11■■■□□ 2.09
CBX4-203ENST00000494546 GYPBP06028 91 aa28.11■■■□□ 2.09
CBX4-203ENST00000494546 ZNF771Q7L3S4 317 aaPredicted RBP28.11■■■□□ 2.09
CBX4-203ENST00000494546 PEG10Q86TG7 708 aaKnown RBP28.11■■■□□ 2.09
CBX4-203ENST00000494546 TEX47Q8TBZ9 253 aa28.11■■■□□ 2.09
CBX4-203ENST00000494546 SLC7A6OSQ96CW6 309 aaPredicted RBP28.11■■■□□ 2.09
CBX4-203ENST00000494546 RAB39BQ96DA2 213 aa28.11■■■□□ 2.09
CBX4-203ENST00000494546 IFNGP01579 166 aa28.1■■■□□ 2.09
CBX4-203ENST00000494546 TNFRSF1AP19438 455 aa28.1■■■□□ 2.09
CBX4-203ENST00000494546 SRP14P37108 136 aaKnown RBP28.1■■■□□ 2.09
CBX4-203ENST00000494546 ATG16L2Q8NAA4 619 aa28.1■■■□□ 2.09
CBX4-203ENST00000494546 ITLN1Q8WWA0 313 aa28.1■■■□□ 2.09
CBX4-203ENST00000494546 ZNF582Q96NG8 517 aaPredicted RBP28.1■■■□□ 2.09
CBX4-203ENST00000494546 GAL3ST1Q99999 423 aa28.1■■■□□ 2.09
CBX4-203ENST00000494546 C1QTNF5Q9BXJ0 243 aa28.1■■■□□ 2.09
CBX4-203ENST00000494546 DCAF16Q9NXF7 216 aa28.1■■■□□ 2.09
CBX4-203ENST00000494546 CUBNO60494 3623 aa28.1■■■□□ 2.09
CBX4-203ENST00000494546 RIIAD1A6NNX1 92 aa28.09■■■□□ 2.09
CBX4-203ENST00000494546 RNF212BA8MTL3 300 aa28.09■■■□□ 2.09
CBX4-203ENST00000494546 H3BN98 237 aa28.09■■■□□ 2.09
CBX4-203ENST00000494546 PHF1O43189 567 aaPredicted RBP28.09■■■□□ 2.09
CBX4-203ENST00000494546 LCATP04180 440 aa28.09■■■□□ 2.09
CBX4-203ENST00000494546 ANPEPP15144 967 aa28.09■■■□□ 2.09
CBX4-203ENST00000494546 FMO3P31513 532 aa28.09■■■□□ 2.09
CBX4-203ENST00000494546 ACSM5Q6NUN0 579 aa28.09■■■□□ 2.09
CBX4-203ENST00000494546 CD300LDQ6UXZ3 194 aa28.09■■■□□ 2.09
CBX4-203ENST00000494546 COLCA1Q6ZS62 124 aa28.09■■■□□ 2.09
CBX4-203ENST00000494546 TMEM179BQ7Z7N9 219 aa28.09■■■□□ 2.09
CBX4-203ENST00000494546 NAA40Q86UY6 237 aa28.09■■■□□ 2.09
CBX4-203ENST00000494546 OR8G5Q8NG78 346 aa28.09■■■□□ 2.09
CBX4-203ENST00000494546 PDP1Q9P0J1 537 aaPredicted RBP28.09■■■□□ 2.09
CBX4-203ENST00000494546 IL19Q9UHD0 177 aa28.09■■■□□ 2.09
CBX4-203ENST00000494546 COMMD3-BMI1R4GMX3 469 aa28.09■■■□□ 2.09
CBX4-203ENST00000494546 FBN1P35555 2871 aaKnown RBP28.09■■■□□ 2.09
CBX4-203ENST00000494546 SURF4O15260 269 aa28.08■■■□□ 2.09
CBX4-203ENST00000494546 DNAJC8O75937 253 aaPredicted RBP28.08■■■□□ 2.09
CBX4-203ENST00000494546 IGHV2-5P01817 119 aa28.08■■■□□ 2.09
CBX4-203ENST00000494546 CLUP10909 449 aa28.08■■■□□ 2.09
CBX4-203ENST00000494546 RBMXP38159 391 aaKnown RBP28.08■■■□□ 2.09
CBX4-203ENST00000494546 SLC25A1P53007 311 aa28.08■■■□□ 2.09
CBX4-203ENST00000494546 TPTEP56180 551 aa28.08■■■□□ 2.09
CBX4-203ENST00000494546 IQCF1Q8N6M8 205 aa28.08■■■□□ 2.09
CBX4-203ENST00000494546 ZNF511Q8NB15 262 aa28.08■■■□□ 2.09
CBX4-203ENST00000494546 BHLHE23Q8NDY6 225 aa28.08■■■□□ 2.09
CBX4-203ENST00000494546 OR10S1Q8NGN2 331 aa28.08■■■□□ 2.09
CBX4-203ENST00000494546 OR6K6Q8NGW6 343 aa28.08■■■□□ 2.09
CBX4-203ENST00000494546 OR2V2Q96R30 315 aa28.08■■■□□ 2.09
CBX4-203ENST00000494546 HCAR1Q9BXC0 346 aa28.08■■■□□ 2.09
CBX4-203ENST00000494546 NMNAT2Q9BZQ4 307 aa28.08■■■□□ 2.09
CBX4-203ENST00000494546 TMEM106BQ9NUM4 274 aa28.08■■■□□ 2.09
CBX4-203ENST00000494546 ATRQ13535 2644 aa28.07■■■□□ 2.08
CBX4-203ENST00000494546 ARRDC5A6NEK1 342 aa28.07■■■□□ 2.08
CBX4-203ENST00000494546 DEAF1O75398 565 aaPredicted RBP28.07■■■□□ 2.08
CBX4-203ENST00000494546 E2F6O75461 281 aa28.07■■■□□ 2.08
CBX4-203ENST00000494546 SPARCP09486 303 aa28.07■■■□□ 2.08
CBX4-203ENST00000494546 PSKH1P11801 424 aa28.07■■■□□ 2.08
CBX4-203ENST00000494546 ZNF3P17036 446 aa28.07■■■□□ 2.08
CBX4-203ENST00000494546 HOXB6P17509 224 aaKnown RBP28.07■■■□□ 2.08
CBX4-203ENST00000494546 SPI1P17947 270 aa28.07■■■□□ 2.08
CBX4-203ENST00000494546 PRSS12P56730 875 aa28.07■■■□□ 2.08
CBX4-203ENST00000494546 OR10AD1Q8NGE0 317 aa28.07■■■□□ 2.08
CBX4-203ENST00000494546 OR13G1Q8NGZ3 307 aa28.07■■■□□ 2.08
CBX4-203ENST00000494546 SPTSSAQ969W0 71 aa28.07■■■□□ 2.08
CBX4-203ENST00000494546 UBAP1Q9NZ09 502 aa28.07■■■□□ 2.08
CBX4-203ENST00000494546 POMPQ9Y244 141 aa28.07■■■□□ 2.08
CBX4-203ENST00000494546 NPTNQ9Y639 398 aa28.07■■■□□ 2.08
CBX4-203ENST00000494546 M0R135 149 aa28.06■■■□□ 2.08
CBX4-203ENST00000494546 ENTPD1P49961 510 aa28.06■■■□□ 2.08
CBX4-203ENST00000494546 DCXRQ7Z4W1 244 aa28.06■■■□□ 2.08
CBX4-203ENST00000494546 ZNF799Q96GE5 643 aa28.06■■■□□ 2.08
CBX4-203ENST00000494546 CMC2Q9NRP2 79 aa28.06■■■□□ 2.08
CBX4-203ENST00000494546 PPP1R3CQ9UQK1 317 aa28.06■■■□□ 2.08
CBX4-203ENST00000494546 SVEP1Q4LDE5 3571 aa28.06■■■□□ 2.08
CBX4-203ENST00000494546 TRAV20A0A0B4J274 112 aa28.05■■■□□ 2.08
CBX4-203ENST00000494546 POU1F1P28069 291 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms