RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 H3BSA7 217 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 LMX1BO60663 402 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 ACSM4P0C7M7 580 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 FMO3P31513 532 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 GRK5P34947 590 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 CRYBB2P43320 205 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 RASSF2P50749 326 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 TNFAIP6P98066 277 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-224ENST00000494132 GINS1Q14691 196 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 C1orf146Q5VVC0 180 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 TMEM236Q5W0B7 351 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 FAM166AQ6J272 317 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 DCXRQ7Z4W1 244 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 C1orf174Q8IYL3 243 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 ATG16L2Q8NAA4 619 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 BHLHE23Q8NDY6 225 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 OR2Z1Q8NG97 314 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 CCL17Q92583 94 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 APOBEC3DQ96AK3 386 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-224ENST00000494132 DCLRE1CQ96SD1 692 aaKnown RBP12.48□□□□□ -0.41
ATG4B-224ENST00000494132 YY1AP1Q9H869 796 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 ZNF556Q9HAH1 456 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 LPAR2Q9HBW0 351 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 NKIRAS2Q9NYR9 191 aa12.48□□□□□ -0.41
ATG4B-224ENST00000494132 IGHV3-64DA0A0J9YX35 117 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 C5orf63A6NC05 138 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 FAM157AC9JC47 383 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 LCATP04180 440 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 OSMP13725 252 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 KITLGP21583 273 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 SLC6A9P48067 706 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 RGS6P49758 472 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 ENTPD1P49961 510 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 SLC25A1P53007 311 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 KRTAP27-1Q3LI81 207 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 FAM209AQ5JX71 171 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 LINC01590Q5TEZ4 76 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 SLC27A4Q6P1M0 643 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 HIPK1Q86Z02 1210 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 ERI1Q8IV48 349 aaKnown RBP12.47□□□□□ -0.41
ATG4B-224ENST00000494132 OR6N2Q8NGY6 317 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 PTP4A1Q93096 173 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 HAVCR1Q96D42 359 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 ELMOD3Q96FG2 381 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 OR51V1Q9H2C8 321 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 CYSLTR2Q9NS75 346 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 CENPMQ9NSP4 180 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 KIF17Q9P2E2 1029 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 KCNS2Q9ULS6 477 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 N6AMT1Q9Y5N5 214 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 DOCK11Q5JSL3 2073 aa12.47□□□□□ -0.41
ATG4B-224ENST00000494132 H0YL77 283 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 M0R135 149 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 ZNF593O00488 134 aaPredicted RBP12.46□□□□□ -0.41
ATG4B-224ENST00000494132 DEAF1O75398 565 aaPredicted RBP12.46□□□□□ -0.41
ATG4B-224ENST00000494132 ATP5HO75947 161 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 SLC2A1P11166 492 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 ANXA8P13928 327 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 PRKXP51817 358 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 TMEM33P57088 247 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 MRPS11P82912 194 aaKnown RBP12.46□□□□□ -0.41
ATG4B-224ENST00000494132 HFEQ30201 348 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 CHRFAM7AQ494W8 412 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 ZMAT1Q5H9K5 638 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 PLBD1Q6P4A8 553 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 SHQ1Q6PI26 577 aaKnown RBP12.46□□□□□ -0.41
ATG4B-224ENST00000494132 BBS1Q8NFJ9 593 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 OR10AD1Q8NGE0 317 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 OR5L1Q8NGL2 311 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 OR2AE1Q8NHA4 323 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 ITLN1Q8WWA0 313 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 UTP4Q969X6 686 aaKnown RBP12.46□□□□□ -0.41
ATG4B-224ENST00000494132 SLAMF6Q96DU3 332 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 ZMYND19Q96E35 227 aaPredicted RBP12.46□□□□□ -0.41
ATG4B-224ENST00000494132 ZNF799Q96GE5 643 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 COG8Q96MW5 612 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 COPS4Q9BT78 406 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 CGGBP1Q9UFW8 167 aaPredicted RBP12.46□□□□□ -0.41
ATG4B-224ENST00000494132 KCNG2Q9UJ96 466 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 WIPI2Q9Y4P8 454 aa12.46□□□□□ -0.41
ATG4B-224ENST00000494132 CUBNO60494 3623 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 CLDN25C9JDP6 229 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 MITFO75030 526 aaPredicted RBP12.45□□□□□ -0.42
ATG4B-224ENST00000494132 ADH4P08319 380 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 RAC2P15153 192 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 HOXB6P17509 224 aaKnown RBP12.45□□□□□ -0.42
ATG4B-224ENST00000494132 LIPAP38571 399 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 DAPP51397 102 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 CDH15P55291 814 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 TPTEP56180 551 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 ECH1Q13011 328 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 CDK5R2Q13319 367 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 EIF2B1Q14232 305 aaKnown RBP12.45□□□□□ -0.42
ATG4B-224ENST00000494132 GK2Q14410 553 aaPredicted RBP12.45□□□□□ -0.42
ATG4B-224ENST00000494132 SNAI3Q3KNW1 292 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 FBXW12Q6X9E4 464 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 COLCA1Q6ZS62 124 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 DPY19L4Q7Z388 723 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 AMIGO2Q86SJ2 522 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 LINC01356Q8N9X3 169 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms