RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 SGCAQ16586 387 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 TMEM69Q5SWH9 247 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 RSBN1Q5VWQ0 802 aaPredicted RBP9.39□□□□□ -0.91
CLCN6-208ENST00000494028 RHOUQ7L0Q8 258 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 PRSS45Q7RTY3 260 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 ADGRE4PQ86SQ3 457 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 VASH2Q86V25 355 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 SIAH3Q8IW03 269 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 SERPINA12Q8IW75 414 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 SULF2Q8IWU5 870 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 TMEM251Q8N6I4 163 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 CLEC1AQ8NC01 280 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 OR51D1Q8NGF3 324 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 OR6M1Q8NGM8 313 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 OR1J2Q8NGS2 313 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 ROBO4Q8WZ75 1007 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 CPNE4Q96A23 557 aaPredicted RBP9.39□□□□□ -0.91
CLCN6-208ENST00000494028 INTS12Q96CB8 462 aaKnown RBP9.39□□□□□ -0.91
CLCN6-208ENST00000494028 ADAT3Q96EY9 351 aaPredicted RBP9.39□□□□□ -0.91
CLCN6-208ENST00000494028 ZNF845Q96IR2 970 aaPredicted RBP9.39□□□□□ -0.91
CLCN6-208ENST00000494028 ZFP3Q96NJ6 502 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 ALKBH3Q96Q83 286 aaPredicted RBP9.39□□□□□ -0.91
CLCN6-208ENST00000494028 C7orf50Q9BRJ6 194 aaKnown RBP9.39□□□□□ -0.91
CLCN6-208ENST00000494028 CGGBP1Q9UFW8 167 aaPredicted RBP9.39□□□□□ -0.91
CLCN6-208ENST00000494028 KLF13Q9Y2Y9 288 aaPredicted RBP9.39□□□□□ -0.91
CLCN6-208ENST00000494028 RBMX2Q9Y388 322 aaKnown RBP9.39□□□□□ -0.91
CLCN6-208ENST00000494028 TMEM272A0A1B0GTI8 110 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 A0A1B0GVI7 797 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 CIB4A0PJX0 185 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 C5orf63A6NC05 138 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 ARGFXA6NJG6 315 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 LINC01387J3KSC0 135 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 LDLRAD4O15165 306 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 SULT1B1O43704 296 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 CTAG2O75638 210 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 KRT33AO76009 404 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 TPPPO94811 219 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 SLC2A1P11166 492 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 ZNF708P17019 499 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 CTSSP25774 331 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 OTX1P32242 354 aaPredicted RBP9.38□□□□□ -0.91
CLCN6-208ENST00000494028 NTF4P34130 210 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 MAGEA5P43359 124 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 CLDN18P56856 261 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 MRPS10P82664 201 aaKnown RBP9.38□□□□□ -0.91
CLCN6-208ENST00000494028 SPOCK1Q08629 439 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 SRSF6Q13247 344 aaKnown RBP9.38□□□□□ -0.91
CLCN6-208ENST00000494028 TATDN3Q17R31 274 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 CCDC92Q53HC0 331 aaPredicted RBP9.38□□□□□ -0.91
CLCN6-208ENST00000494028 C1orf100Q5SVJ3 147 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 OLFML2AQ68BL7 652 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 GLT8D1Q68CQ7 371 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 ZNF529Q6P280 563 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 IGF2-ASQ6U949 168 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 DNM1P46Q6ZS02 220 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 GPR137CQ8N3F9 429 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 GALNT16Q8N428 558 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 TOMM5Q8N4H5 51 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 ZNF283Q8N7M2 679 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 OR52I2Q8NH67 350 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 ABHD3Q8WU67 409 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 SLC7A6Q92536 515 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 TMEM45BQ96B21 275 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 FAM3DQ96BQ1 224 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 ZNF837Q96EG3 531 aaPredicted RBP9.38□□□□□ -0.91
CLCN6-208ENST00000494028 MARVELD1Q9BSK0 173 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 SLC17A5Q9NRA2 495 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 ZNF275Q9NSD4 429 aaPredicted RBP9.38□□□□□ -0.91
CLCN6-208ENST00000494028 TMEM38BQ9NVV0 291 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 ZNF319Q9P2F9 582 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 MRPS7Q9Y2R9 242 aaKnown RBP9.38□□□□□ -0.91
CLCN6-208ENST00000494028 LIPGQ9Y5X9 500 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 ALG5Q9Y673 324 aa9.38□□□□□ -0.91
CLCN6-208ENST00000494028 IGKV3D-15A0A087WSY6 115 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 GGT3PA6NGU5 568 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 HMX3A6NHT5 357 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 ACOT7O00154 380 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 CDK2AP1O14519 115 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 SYT7O43581 403 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 SP1P08047 785 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 LIPCP11150 499 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 PTHLHP12272 177 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 GABRA1P14867 456 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 HTR2CP28335 458 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 PLGLB1Q02325 96 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 DYRK1AQ13627 763 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 RAB35Q15286 201 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 TAF13Q15543 124 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 HYAL4Q2M3T9 481 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 ATAD3CQ5T2N8 411 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 PDSS1Q5T2R2 415 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 MTFR2Q6P444 385 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 ANKRD16Q6P6B7 361 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 FAM57BQ71RH2 274 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 KRT74Q7RTS7 529 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 AAED1Q7RTV5 226 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 GALNTL5Q7Z4T8 443 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 ABHD12BQ7Z5M8 362 aaPredicted RBP9.37□□□□□ -0.91
CLCN6-208ENST00000494028 OR5AS1Q8N127 324 aa9.37□□□□□ -0.91
CLCN6-208ENST00000494028 OR1M1Q8NGA1 313 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms