RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 ZNF550Q7Z398 422 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 GGNQ86UU5 652 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 MSRB3Q8IXL7 192 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 SLC43A2Q8N370 569 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 TOMM5Q8N4H5 51 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 SLC16A11Q8NCK7 471 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 OR6K3Q8NGY3 331 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 OR4C3Q8NH37 302 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 FNDC9Q8TBE3 224 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 POC1BQ8TC44 478 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 SMAP2Q8WU79 429 aaPredicted RBP7.25□□□□□ -1.25
HDAC6-234ENST00000493923 SMPDL3BQ92485 455 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 HOXB13Q92826 284 aaPredicted RBP7.25□□□□□ -1.25
HDAC6-234ENST00000493923 PMM1Q92871 262 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 NINJ1Q92982 152 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 ARSGQ96EG1 525 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 C1GALT1C1Q96EU7 318 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 POM121Q96HA1 1249 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 WFIKKN1Q96NZ8 548 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 PFDN5Q99471 154 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 ATF6BQ99941 703 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 SFXN3Q9BWM7 321 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 TMPRSS5Q9H3S3 457 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 B3GAT2Q9NPZ5 323 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 MIEF1Q9NQG6 463 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 CYSLTR2Q9NS75 346 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 ASB6Q9NWX5 421 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 FAM120CQ9NX05 1096 aaKnown RBP7.25□□□□□ -1.25
HDAC6-234ENST00000493923 SLC25A37Q9NYZ2 338 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 CLEC4AQ9UMR7 237 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 CARHSP1Q9Y2V2 147 aaKnown RBP7.25□□□□□ -1.25
HDAC6-234ENST00000493923 MRPS18CQ9Y3D5 142 aaKnown RBP7.25□□□□□ -1.25
HDAC6-234ENST00000493923 KCNE3Q9Y6H6 103 aa7.25□□□□□ -1.25
HDAC6-234ENST00000493923 IGLV3-32A0A0A0MS00 114 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 ZNF879B4DU55 563 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 H3BML4 177 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 EFNA2O43921 213 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 TMEM127O75204 238 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 NKX2-2O95096 273 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 ADAP00813 363 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 IFNA2P01563 188 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 TFP02787 698 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 IL5P05113 134 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 SLC2A1P11166 492 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 LAMP1P11279 417 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 CD53P19397 219 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 EPHA2P29317 976 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 AGTR1P30556 359 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 NTSP30990 170 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 FRKP42685 505 aaPredicted RBP7.24□□□□□ -1.25
HDAC6-234ENST00000493923 RAB5CP51148 216 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 RIDAP52758 137 aaKnown RBP7.24□□□□□ -1.25
HDAC6-234ENST00000493923 CRISP1P54107 249 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 PRKAG1P54619 331 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 WNT4P56705 351 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 CLDN8P56748 225 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 SEC61A1P61619 476 aaKnown RBP7.24□□□□□ -1.25
HDAC6-234ENST00000493923 RPL38P63173 70 aaKnown RBP7.24□□□□□ -1.25
HDAC6-234ENST00000493923 VLDLRP98155 873 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 SORDQ00796 357 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 MXD1Q05195 221 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 TRAM1Q15629 374 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 CD226Q15762 336 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 SGCAQ16586 387 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 DECR1Q16698 335 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 IFI44LQ53G44 452 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 C22orf42Q6IC83 251 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 CASP12Q6UXS9 341 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 DEF8Q6ZN54 512 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 TMUB2Q71RG4 321 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 GLCCI1Q86VQ1 547 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 CXorf67Q86X51 503 aaPredicted RBP7.24□□□□□ -1.25
HDAC6-234ENST00000493923 SLC30A8Q8IWU4 369 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 ZNF561Q8N587 486 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 C15orf54Q8N8G6 183 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 CNEP1R1Q8N9A8 125 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 ZNF610Q8N9Z0 462 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 NUP43Q8NFH3 380 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 OR4C15Q8NGM1 316 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 OR8J1Q8NGP2 316 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 GOT1L1Q8NHS2 421 aaPredicted RBP7.24□□□□□ -1.25
HDAC6-234ENST00000493923 UBE2FQ969M7 185 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 ADGRG7Q96K78 797 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 CMTM3Q96MX0 182 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 FEVQ99581 238 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 PINK1Q9BXM7 581 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 CACNG6Q9BXT2 260 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 REEP4Q9H6H4 257 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 METTL17Q9H7H0 456 aaPredicted RBP7.24□□□□□ -1.25
HDAC6-234ENST00000493923 CACYBPQ9HB71 228 aaKnown RBP7.24□□□□□ -1.25
HDAC6-234ENST00000493923 KLHL28Q9NXS3 571 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 TAS2R3Q9NYW6 316 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 NTMQ9P121 344 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 RPS6KB2Q9UBS0 482 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 GPR160Q9UJ42 338 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 FOXD3Q9UJU5 478 aaPredicted RBP7.24□□□□□ -1.25
HDAC6-234ENST00000493923 VDAC3Q9Y277 283 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 PLCE1Q9P212 2302 aa7.24□□□□□ -1.25
HDAC6-234ENST00000493923 A0A0D9SG52 128 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 A0A0J9YW62 118 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms