RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 TMEM38BQ9NVV0 291 aa10.56□□□□□ -0.72
UPF3A-210ENST00000493727 HAO2Q9NYQ3 351 aa10.56□□□□□ -0.72
UPF3A-210ENST00000493727 TAS2R16Q9NYV7 291 aa10.56□□□□□ -0.72
UPF3A-210ENST00000493727 UGT2A1Q9Y4X1 527 aa10.56□□□□□ -0.72
UPF3A-210ENST00000493727 COMMD3-BMI1R4GMX3 469 aa10.56□□□□□ -0.72
UPF3A-210ENST00000493727 CR1P17927 2039 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 LYZL6O75951 148 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 MPZL1O95297 269 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 RAB36O95755 333 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 TFP02787 698 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 ITGA5P08648 1049 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 SBK2P0C263 348 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 IGHV1-2P23083 117 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 IL32P24001 234 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 FOXG1P55316 489 aaPredicted RBP10.55□□□□□ -0.72
UPF3A-210ENST00000493727 ACTC1P68032 377 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 ACTA1P68133 377 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 MRPS34P82930 218 aaKnown RBP10.55□□□□□ -0.72
UPF3A-210ENST00000493727 KRTAP1-1Q07627 177 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 P2RY6Q15077 328 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 ADAM5Q6NVV9 412 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 SLC16A9Q7RTY1 509 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 SLC35F2Q8IXU6 374 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 LRRC18Q8N456 261 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 OR4F15Q8NGB8 312 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 OR1K1Q8NGR3 316 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 IGFBPL1Q8WX77 278 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 HTRA1Q92743 480 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 GGHQ92820 318 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 LGALS12Q96DT0 336 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 NR1H4Q96RI1 486 aaPredicted RBP10.55□□□□□ -0.72
UPF3A-210ENST00000493727 TBX5Q99593 518 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 RHNO1Q9BSD3 238 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 ESRP2Q9H6T0 727 aaKnown RBP10.55□□□□□ -0.72
UPF3A-210ENST00000493727 WDR76Q9H967 626 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 SIAEQ9HAT2 523 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 ADGRL4Q9HBW9 690 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 CCNB1IP1Q9NPC3 277 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 MRPL22Q9NWU5 206 aaKnown RBP10.55□□□□□ -0.72
UPF3A-210ENST00000493727 CHCHD3Q9NX63 227 aaKnown RBP10.55□□□□□ -0.72
UPF3A-210ENST00000493727 CNOT2Q9NZN8 540 aaKnown RBP10.55□□□□□ -0.72
UPF3A-210ENST00000493727 PSORS1C1Q9UIG5 152 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 KCNG2Q9UJ96 466 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 PCDHGB1Q9Y5G3 927 aa10.55□□□□□ -0.72
UPF3A-210ENST00000493727 HEATR1Q9H583 2144 aaKnown RBP10.55□□□□□ -0.72
UPF3A-210ENST00000493727 ZNF670-ZNF695F2Z2N8 137 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 ZNF593O00488 134 aaPredicted RBP10.54□□□□□ -0.72
UPF3A-210ENST00000493727 RGS10O43665 173 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 RAD51DO75771 328 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 OR8G3PP0DMU2 310 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 PIPP12273 146 aaPredicted RBP10.54□□□□□ -0.72
UPF3A-210ENST00000493727 MYL12AP19105 171 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 CRHBPP24387 322 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 GDNFP39905 211 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 ATP5J2P56134 94 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 GABARAPL2P60520 117 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 UBE2NP61088 152 aaKnown RBP10.54□□□□□ -0.72
UPF3A-210ENST00000493727 ST3GAL4Q11206 333 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 NRN1LQ496H8 165 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 ANKRD16Q6P6B7 361 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 FOXL2NBQ6ZUU3 175 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 BHLHA15Q7RTS1 189 aaPredicted RBP10.54□□□□□ -0.72
UPF3A-210ENST00000493727 SLC16A14Q7RTX9 510 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 LINC00346Q8IVM7 164 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 TIGD4Q8IY51 512 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 GABRG1Q8N1C3 465 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 SLC22A24Q8N4F4 322 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 OR52I1Q8NGK6 324 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 OR2AJ1Q8NGZ0 328 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 HSD17B8Q92506 261 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 AKAP1Q92667 903 aaKnown RBP eCLIP10.54□□□□□ -0.72
UPF3A-210ENST00000493727 NABP1Q96AH0 204 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 S100PBPQ96BU1 408 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 TRMT61AQ96FX7 289 aaKnown RBP10.54□□□□□ -0.72
UPF3A-210ENST00000493727 MRPL48Q96GC5 212 aaKnown RBP10.54□□□□□ -0.72
UPF3A-210ENST00000493727 TMEM80Q96HE8 168 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 MNTQ99583 582 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 SH3GL3Q99963 347 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 ZNF416Q9BWM5 594 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 PLCE1Q9P212 2302 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 LAMP5Q9UJQ1 280 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 RNF115Q9Y4L5 304 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 SNX5Q9Y5X3 404 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 TMEM14AQ9Y6G1 99 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 SVEP1Q4LDE5 3571 aa10.54□□□□□ -0.72
UPF3A-210ENST00000493727 DAPL1A0PJW8 107 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 C12orf71A8MTZ7 269 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 PHYHO14832 338 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 CRLF1O75462 422 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 SCG5P05408 212 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 CD3EP07766 207 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 CST2P09228 141 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 JUNBP17275 347 aaPredicted RBP10.53□□□□□ -0.72
UPF3A-210ENST00000493727 COX5AP20674 150 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 DCKP27707 260 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 RPS27P42677 84 aaKnown RBP10.53□□□□□ -0.72
UPF3A-210ENST00000493727 SLC15A1P46059 708 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 PCBD1P61457 104 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 LSM6P62312 80 aaKnown RBP10.53□□□□□ -0.72
UPF3A-210ENST00000493727 PIGFQ07326 219 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms