RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 XPO6Q96QU8 1125 aaKnown RBP1.94□□□□□ -2.1
SMC4-223ENST00000493695 ZNF382Q96SR6 550 aa1.94□□□□□ -2.1
SMC4-223ENST00000493695 A0A075B6Q4 140 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 TRAV40A0A0B4J280 105 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 A0A0J9YXV3 536 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 KBTBD11-OT1A0A1B0GTJ5 212 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 SMCO2A6NFE2 343 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 H7C417 338 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 REM1O75628 298 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 CTAG2O75638 210 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 RBBP9O75884 186 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 SEMA3DO95025 777 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 CD160O95971 181 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 OXTP01178 125 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 OR8U9P0C7N5 309 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 POLR2MP0CAP2 368 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 NPY1RP25929 384 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 U2AF2P26368 475 aaKnown RBP eCLIP1.93□□□□□ -2.1
SMC4-223ENST00000493695 EIF3EP60228 445 aaKnown RBP1.93□□□□□ -2.1
SMC4-223ENST00000493695 SPESP1Q6UW49 350 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 LGI3Q8N145 548 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 COX18Q8N8Q8 333 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 GATSQ8NAP1 163 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 OR9G4Q8NGQ1 327 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 SYNPRQ8TBG9 265 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 EEF1AKMT3Q96AZ1 226 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 DCPSQ96C86 337 aaKnown RBP1.93□□□□□ -2.1
SMC4-223ENST00000493695 ZYG11BQ9C0D3 744 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 CLN8Q9UBY8 286 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 MTFP1Q9UDX5 166 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 S4R3C0 116 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 PCM1Q15154 2024 aa1.93□□□□□ -2.1
SMC4-223ENST00000493695 A0A1B0GW55 424 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 OR6C74A6NCV1 312 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 PDZK1P1A8MUH7 402 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 A8MUU9 505 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 RRP8O43159 456 aaKnown RBP1.92□□□□□ -2.1
SMC4-223ENST00000493695 EIF4EP06730 217 aaKnown RBP1.92□□□□□ -2.1
SMC4-223ENST00000493695 OR56A5P0C7T3 313 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 DUX4L2P0CJ85 424 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 DUX4L3P0CJ86 424 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 DUX4L5P0CJ88 424 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 DUX4L6P0CJ89 424 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 DUX4L7P0CJ90 424 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 GTF2E2P29084 291 aaKnown RBP1.92□□□□□ -2.1
SMC4-223ENST00000493695 TNFSF9P41273 254 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 KIR3DL2P43630 455 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 SLC11A1P49279 550 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 PRRX1P54821 245 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 ZNF121P58317 390 aaPredicted RBP1.92□□□□□ -2.1
SMC4-223ENST00000493695 MERTKQ12866 999 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 CUL2Q13617 745 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 RCN1Q15293 331 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 PSMD5Q16401 504 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 PRSS8Q16651 343 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 SAXO2Q658L1 398 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 H3F3CQ6NXT2 135 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 CENPQQ7L2Z9 268 aaPredicted RBP1.92□□□□□ -2.1
SMC4-223ENST00000493695 NEGR1Q7Z3B1 354 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 GABRG1Q8N1C3 465 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 LINC01560Q8TB33 94 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 LINC00477Q96M19 166 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 ZNF488Q96MN9 340 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 RNF145Q96MT1 663 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 DOK1Q99704 481 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 ACTR3CQ9C0K3 210 aaPredicted RBP1.92□□□□□ -2.1
SMC4-223ENST00000493695 FAM192AQ9GZU8 254 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 TMEM38AQ9H6F2 299 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 EXO5Q9H790 373 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 AUNIPQ9H7T9 357 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 RETNQ9HD89 108 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 C8orf17Q9NRJ1 99 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 CLN6Q9NWW5 311 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 DUX4Q9UBX2 424 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 SIGLEC9Q9Y336 463 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 HYOU1Q9Y4L1 999 aa1.92□□□□□ -2.1
SMC4-223ENST00000493695 BRWD3Q6RI45 1802 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 GPR179Q6PRD1 2367 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 IGLV3-12A0A075B6K2 115 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 TRAV6A0A075B6T7 132 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 IGHV3OR16-9A0A0B4J2B5 98 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 C7orf66A4D0T2 115 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 KRBOX1C9JBD0 128 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 RPL36A-HNRNPH2H7BZ11 118 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 H7C0C1 242 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 L7N2F9 121 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 CACNG3O60359 315 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 ERCC1P07992 297 aaPredicted RBP1.91□□□□□ -2.1
SMC4-223ENST00000493695 RAB4AP20338 218 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 ATP5OP48047 213 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 RPS23P62266 143 aaKnown RBP1.91□□□□□ -2.1
SMC4-223ENST00000493695 CRADDP78560 199 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 IFT88Q13099 833 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 ITIH4Q14624 930 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 RNASE13Q5GAN3 156 aaKnown RBP1.91□□□□□ -2.1
SMC4-223ENST00000493695 TCEAL5Q5H9L2 206 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 STUMQ69YW2 141 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 BRD3OSQ6XYD6 125 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 SSX9Q7RTT3 188 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 LUZP2Q86TE4 346 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms