RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 OR52E2Q8NGJ4 325 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 GNPDA2Q8TDQ7 276 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 APOBEC3DQ96AK3 386 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-223ENST00000493618 MEGF10Q96KG7 1140 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 PITX2Q99697 317 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 HDHD2Q9H0R4 259 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 ATPIF1Q9UII2 106 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 DOCK11Q5JSL3 2073 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 TENM1Q9UKZ4 2725 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 TMEM178BH3BS89 294 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 TRIM77I1YAP6 450 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 SURF4O15260 269 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 ATP8B1O43520 1251 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 FSHBP01225 129 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 ACSM4P0C7M7 580 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 SELEP16581 610 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 GATA3P23771 443 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 CFPP27918 469 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 PYCR1P32322 319 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 SLC6A9P48067 706 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 GSSP48637 474 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 TMEM155Q4W5P6 130 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 PGBD2Q6P3X8 592 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 CYP2R1Q6VVX0 501 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 ZNF620Q6ZNG0 422 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 MOGAT3Q86VF5 341 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 DEFB107AQ8IZN7 70 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 DEFB108BQ8NET1 73 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 OR9Q2Q8NGE9 314 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 OR2AJ1Q8NGZ0 328 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 OR13G1Q8NGZ3 307 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 ZNF582Q96NG8 517 aaPredicted RBP12.31□□□□□ -0.44
ATG4B-223ENST00000493618 CDADC1Q9BWV3 514 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 SUCNR1Q9BXA5 334 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 ESM1Q9NQ30 184 aa12.31□□□□□ -0.44
ATG4B-223ENST00000493618 TVP23AA6NH52 213 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 F5H0A9 414 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-223ENST00000493618 ARPC3O15145 178 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 LCATP04180 440 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 HLA-DPB1P04440 258 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 ATP6V1B2P21281 511 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 GGT2P36268 569 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 IFNGR2P38484 337 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 MDH2P40926 338 aaKnown RBP12.3□□□□□ -0.44
ATG4B-223ENST00000493618 RPS27P42677 84 aaKnown RBP12.3□□□□□ -0.44
ATG4B-223ENST00000493618 TRAP1Q12931 704 aaKnown RBP12.3□□□□□ -0.44
ATG4B-223ENST00000493618 PPP1R8Q12972 351 aaKnown RBP12.3□□□□□ -0.44
ATG4B-223ENST00000493618 TSPAN31Q12999 210 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 KRTAP27-1Q3LI81 207 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 SLC36A3Q495N2 470 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 ARMCX4Q5H9R4 360 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 FAM201AQ5SY85 155 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 LYPD4Q6UWN0 246 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 C16orf89Q6UX73 402 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 USP43Q70EL4 1123 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 ZBTB46Q86UZ6 589 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 CYB561A3Q8NBI2 242 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 ZFAND2BQ8WV99 257 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 ZNRF4Q8WWF5 429 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 ATF6BQ99941 703 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 SLC30A2Q9BRI3 323 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 IL1RAPQ9NPH3 570 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 PNRC2Q9NPJ4 139 aaKnown RBP12.3□□□□□ -0.44
ATG4B-223ENST00000493618 MRPL22Q9NWU5 206 aaKnown RBP12.3□□□□□ -0.44
ATG4B-223ENST00000493618 ARL2BPQ9Y2Y0 163 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 PPIAL4AQ9Y536 164 aa12.3□□□□□ -0.44
ATG4B-223ENST00000493618 CEACAM18A8MTB9 384 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 IQCF6A8MYZ5 107 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 J3QW42 95 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 PSKH1P11801 424 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 ZNF12P17014 697 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 ANOS1P23352 680 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 PMELP40967 661 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 SRP9P49458 86 aaKnown RBP12.29□□□□□ -0.44
ATG4B-223ENST00000493618 ZNF154Q13106 437 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 ESCO2Q56NI9 601 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 SLC27A4Q6P1M0 643 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 SIGLECL1Q8N7X8 197 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 ZDHHC22Q8N966 263 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 OR51L1Q8NGJ5 315 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 FAM216AQ8WUB2 273 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 GCDHQ92947 438 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-223ENST00000493618 SLCO4A1Q96BD0 722 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 MAP6Q96JE9 813 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 JMJD8Q96S16 334 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 BTBD10Q9BSF8 475 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 HCAR1Q9BXC0 346 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 C1QTNF5Q9BXJ0 243 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 PLA2G12AQ9BZM1 189 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 TMEM100Q9NV29 134 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 CYB5R1Q9UHQ9 305 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 INSIG2Q9Y5U4 225 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 AUP1Q9Y679 476 aa12.29□□□□□ -0.44
ATG4B-223ENST00000493618 PPIAL4EA0A075B759 164 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 IGHV3OR16-10A0A075B7F0 116 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 PPIAL4CA0A0B4J2A2 164 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 PPIAL4DF5H284 164 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 TNFRSF11BO00300 401 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 IDH3BO43837 385 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 PPIAL4FP0DN26 164 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms