RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 PAX2Q02962 417 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 PAX8Q06710 450 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 SEC23BQ15437 767 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 SLC9A3R2Q15599 337 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 KCNMB1Q16558 191 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 MEP1BQ16820 701 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 C8orf82Q6P1X6 216 aaPredicted RBP8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 BTNL3Q6UXE8 466 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 LRRN1Q6UXK5 716 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 DPY19L2P2Q6ZN68 376 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 PTCHD4Q6ZW05 846 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 KLBQ86Z14 1044 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 BHLHE23Q8NDY6 225 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 GJC3Q8NFK1 279 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 BCAS4Q8TDM0 211 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 APOBEC3DQ96AK3 386 aaPredicted RBP8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 PLEKHA8Q96JA3 519 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 TSSK2Q96PF2 358 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 GPX7Q96SL4 187 aaPredicted RBP8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 HDHD2Q9H0R4 259 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 UNKLQ9H9P5 680 aaKnown RBP8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 MIOXQ9UGB7 285 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 AURKCQ9UQB9 309 aa8.6□□□□□ -1.03
NUDCD3-210ENST00000493613 TRAV40A0A0B4J280 105 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 IGHV2-70DA0A0C4DH43 119 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 UNC119BA6NIH7 251 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 LRRC30A6NM36 301 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 F5H5P2 479 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 CLDN34H7C241 214 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 MLNRO43193 412 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 PPP1R3DO95685 299 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 FAM107AO95990 144 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 PLATP00750 562 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 RHCEP18577 417 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 CPT2P23786 658 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 MTNR1AP48039 350 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 RPS6KA3P51812 740 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 FXYD6P3P58550 94 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 PSME3P61289 254 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 HIST1H3AP68431 136 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 IL13RA1P78552 427 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 DBPQ10586 325 aaPredicted RBP8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 KRT72Q14CN4 511 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 ZNF404Q494X3 552 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 HIST2H3PS2Q5TEC6 136 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 GLYATQ6IB77 296 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 LEG1Q6P5S2 330 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 PGM2L1Q6PCE3 622 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 DNM1P34Q6PK57 102 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 CORO6Q6QEF8 472 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 HACD2Q6Y1H2 254 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 C9orf139Q6ZV77 190 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 HIST2H3AQ71DI3 136 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 NLRC3Q7RTR2 1065 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 MOGAT3Q86VF5 341 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 JAZF1Q86VZ6 243 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 C1orf87Q8N0U7 546 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 FAM86B1Q8N7N1 296 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 RAB40AQ8WXH6 277 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 UPRTQ96BW1 309 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 NEIL1Q96FI4 390 aaPredicted RBP8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 ERMAPQ96PL5 475 aaPredicted RBP8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 CCT8L2Q96SF2 557 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 COQ7Q99807 217 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 SLC30A2Q9BRI3 323 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 TMEM246Q9BRR3 403 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 HCAR1Q9BXC0 346 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 WDR76Q9H967 626 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 TMEM165Q9HC07 324 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 SRA1Q9HD15 236 aaKnown RBP8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 KRCC1Q9NPI7 259 aaPredicted RBP8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 LHFPL6Q9Y693 200 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 V9GYQ6 96 aa8.59□□□□□ -1.03
NUDCD3-210ENST00000493613 POM121CA8CG34 1229 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 IQCF6A8MYZ5 107 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 DCTN6O00399 190 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 GMNNO75496 209 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 TXNDC12O95881 172 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 HLA-DPB1P04440 258 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 SELEP16581 610 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 FPR3P25089 353 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 CRABP1P29762 137 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 PITPNBP48739 271 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 PRSS12P56730 875 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 COX10Q12887 443 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 ZNF181Q2M3W8 571 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 SMARCD3Q6STE5 483 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 RNF148Q8N7C7 305 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 OR8B3Q8NGG8 313 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 FANK1Q8TC84 345 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 TAF15Q92804 592 aaKnown RBP eCLIP8.58□□□□□ -1.041e-8■■■□□ 17.5
NUDCD3-210ENST00000493613 CMTM5Q96DZ9 223 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 C7orf34Q96L11 122 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 OR8B2Q96RD0 313 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 NMNAT3Q96T66 252 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 ELAC2Q9BQ52 826 aaKnown RBP8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 SPAG4Q9NPE6 437 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 DCAF13Q9NV06 445 aaKnown RBP8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 TMEM100Q9NV29 134 aa8.58□□□□□ -1.04
NUDCD3-210ENST00000493613 ADA2Q9NZK5 511 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms