RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 SEMA4GQ9NTN9 838 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 PIGVQ9NUD9 493 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 TAS2R8Q9NYW2 309 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 PADI3Q9ULW8 664 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 PCYT1BQ9Y5K3 369 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-205ENST00000493587 CACNA1CQ13936 2221 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 C2orf16Q68DN1 1984 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 RPL36A-HNRNPH2H7BZ11 118 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 M0QYG6 137 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 FFAR2O15552 330 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 TSPAN6O43657 245 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 PDYNP01213 254 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 CLEC3BP05452 202 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 MELTFP08582 738 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 CTXN2P0C2S0 81 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 TDGF1P13385 188 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 AKR1C4P17516 323 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 ELAVL4P26378 380 aaKnown RBP6.2□□□□□ -1.42
VPS13B-205ENST00000493587 CD52P31358 61 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 GABRA4P48169 554 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 TAS2R20P59543 309 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 SELENOVP59797 346 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 BDH1Q02338 343 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 TLE3Q04726 772 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 NOGQ13253 232 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 PIN1Q13526 163 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-205ENST00000493587 COX20Q5RI15 118 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 ATXN7L2Q5T6C5 722 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-205ENST00000493587 UNQ5815/PRO19632Q6UWF5 114 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 HFE2Q6ZVN8 426 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 NPAS4Q8IUM7 802 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 GBGT1Q8N5D6 347 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 ZNF709Q8N972 641 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 OR9K2Q8NGE7 335 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 TMEM37Q8WXS4 190 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 GHSRQ92847 366 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 MS4A10Q96PG2 267 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 SYT3Q9BQG1 590 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 SLC35A5Q9BS91 424 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 CNTD2Q9H8S5 307 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 POLR3KQ9Y2Y1 108 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-205ENST00000493587 MTCH2Q9Y6C9 303 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 TSPAN11A1L157 253 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 ZNF814B7Z6K7 855 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 CLDN5O00501 218 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 CYR61O00622 381 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 GPR39O43194 453 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 CD3DP04234 171 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 LSSP48449 732 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 NPY4RP50391 375 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 CRYBA2P53672 197 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 DLK1P80370 383 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 NAAAQ02083 359 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 CRMP1Q14194 572 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 CNN3Q15417 329 aaKnown RBP6.19□□□□□ -1.42
VPS13B-205ENST00000493587 PRPF38BQ5VTL8 546 aaKnown RBP6.19□□□□□ -1.42
VPS13B-205ENST00000493587 OR4K1Q8NGD4 311 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 ORAOV1Q8WV07 137 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 HAVCR1Q96D42 359 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 CDKN2AIPNLQ96HQ2 116 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 SMIM8Q96KF7 97 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 MYADMQ96S97 322 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 AIF1LQ9BQI0 150 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 NIPSNAP3BQ9BS92 247 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 MED10Q9BTT4 135 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 KLHL28Q9NXS3 571 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 GULP1Q9UBP9 304 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 RAB22AQ9UL26 194 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 XIRP2A4UGR9 3374 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 IGLV3-10A0A075B6K4 115 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 TRAV18A0A075B6X5 111 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 H3BQ15 152 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 J3KRW8 73 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 CD8AP01732 235 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 ACP5P13686 325 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 S100GP29377 79 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 HNRNPA3P51991 378 aaKnown RBP6.19□□□□□ -1.42
VPS13B-205ENST00000493587 FXYD6P3P58550 94 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 TIAL1Q01085 375 aaKnown RBP eCLIP6.19□□□□□ -1.42
VPS13B-205ENST00000493587 TMEM183BQ1AE95 376 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 CLEC12BQ2HXU8 276 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 KLHL24Q6TFL4 600 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 COX15Q7KZN9 410 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 ADCK2Q7Z695 626 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 C17orf78Q8N4C9 275 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 FAM89BQ8N5H3 189 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 SP7Q8TDD2 431 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-205ENST00000493587 ADAMTS17Q8TE56 1095 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 C15orf40Q8WUR7 153 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 TMEM234Q8WY98 164 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 HIST1H2AAQ96QV6 131 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 ZNF587Q96SQ5 575 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-205ENST00000493587 CABLES2Q9BTV7 478 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 C1QTNF3Q9BXJ4 246 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 SMG9Q9H0W8 520 aaKnown RBP6.19□□□□□ -1.42
VPS13B-205ENST00000493587 LRFN1Q9P244 771 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 APOBEC3BQ9UH17 382 aaKnown RBP6.19□□□□□ -1.42
VPS13B-205ENST00000493587 MEMO1Q9Y316 297 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 MRPS2Q9Y399 296 aaKnown RBP6.19□□□□□ -1.42
VPS13B-205ENST00000493587 A0A0G2JK05 382 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms