RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 OR2H1Q9GZK4 316 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 WNT5BQ9H1J7 359 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 ZNF442Q9H7R0 627 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 TUBG2Q9NRH3 451 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 PAPOLBQ9NRJ5 636 aaKnown RBP5.8□□□□□ -1.48
VPS52-219ENST00000493379 MRPL22Q9NWU5 206 aaKnown RBP5.8□□□□□ -1.48
VPS52-219ENST00000493379 CISD1Q9NZ45 108 aaKnown RBP5.8□□□□□ -1.48
VPS52-219ENST00000493379 CYB5R1Q9UHQ9 305 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 ENOPH1Q9UHY7 261 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 OAZ3Q9UMX2 235 aa5.8□□□□□ -1.48
VPS52-219ENST00000493379 PLCE1Q9P212 2302 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 LOC100509620A0A075B734 347 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 A0A0A6YYJ9 748 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 TMEM129A0AVI4 362 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 OR6C6A6NF89 314 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 C12orf71A8MTZ7 269 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 CASQ2O14958 399 aaPredicted RBP5.79□□□□□ -1.48
VPS52-219ENST00000493379 SYNGR3O43761 229 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 MPZL1O95297 269 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 IFNA2P01563 188 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 RAF1P04049 648 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 CD79AP11912 226 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 ZNF23P17027 643 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 ZNF32P17041 273 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 SPI1P17947 270 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 EGR1P18146 543 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 SLC2A5P22732 501 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 APEX1P27695 318 aaKnown RBP5.79□□□□□ -1.48
VPS52-219ENST00000493379 EPHA2P29317 976 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 APOBEC3AP31941 199 aaPredicted RBP5.79□□□□□ -1.48
VPS52-219ENST00000493379 OTX1P32242 354 aaPredicted RBP5.79□□□□□ -1.48
VPS52-219ENST00000493379 TTKP33981 857 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 GLRXP35754 106 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 ALDH3A2P51648 485 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 AQP6Q13520 282 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 CRMP1Q14194 572 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 RAB39AQ14964 217 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 EFNB3Q15768 340 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 SGCAQ16586 387 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 DEFB113Q30KQ7 82 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 CCDC92Q53HC0 331 aaPredicted RBP5.79□□□□□ -1.48
VPS52-219ENST00000493379 SLC35D3Q5M8T2 416 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 CLEC12AQ5QGZ9 265 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 AADACL4Q5VUY2 407 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 TMEM53Q6P2H8 277 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 PRSS57Q6UWY2 283 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 B3GLCTQ6Y288 498 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 ATG16L2Q8NAA4 619 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 GJC3Q8NFK1 279 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 OR1J2Q8NGS2 313 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 SVIPQ8NHG7 77 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 TEX47Q8TBZ9 253 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 SMAP2Q8WU79 429 aaPredicted RBP5.79□□□□□ -1.48
VPS52-219ENST00000493379 TMEM171Q8WVE6 324 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 TRUB1Q8WWH5 349 aaKnown RBP5.79□□□□□ -1.48
VPS52-219ENST00000493379 C11orf40Q8WZ69 217 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 NSMAFQ92636 917 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 AKAP1Q92667 903 aaKnown RBP eCLIP5.79□□□□□ -1.48
VPS52-219ENST00000493379 RDH12Q96NR8 316 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 SLC29A1Q99808 456 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 CIB1Q99828 191 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 TRAF4Q9BUZ4 470 aaPredicted RBP5.79□□□□□ -1.48
VPS52-219ENST00000493379 C1QTNF6Q9BXI9 259 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 KCNN2Q9H2S1 579 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 SEC61A2Q9H9S3 476 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 PNRC2Q9NPJ4 139 aaKnown RBP5.79□□□□□ -1.48
VPS52-219ENST00000493379 C8orf4Q9NR00 106 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 TBC1D23Q9NUY8 699 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 TBCCD1Q9NVR7 557 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 BEX4Q9NWD9 120 aaPredicted RBP5.79□□□□□ -1.48
VPS52-219ENST00000493379 HAO2Q9NYQ3 351 aa5.79□□□□□ -1.48
VPS52-219ENST00000493379 FBXO9Q9UK97 447 aaPredicted RBP5.79□□□□□ -1.48
VPS52-219ENST00000493379 IGLV3-9A0A075B6K5 115 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 RIIAD1A6NNX1 92 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 H3BN98 237 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 H3BSA7 217 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 H7C1C5 153 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 M0R1B8 84 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 DLGAP1O14490 977 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 SLC16A6O15403 523 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 MITFO75030 526 aaPredicted RBP5.78□□□□□ -1.48
VPS52-219ENST00000493379 SEC14L2O76054 403 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 GLCEO94923 617 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 SOX14O95416 240 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 RAB36O95755 333 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 IFNGP01579 166 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 SOD3P08294 240 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 PATE4P0C8F1 98 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 ZNF250P15622 560 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 POLR2IP36954 125 aaKnown RBP5.78□□□□□ -1.48
VPS52-219ENST00000493379 IDH3GP51553 393 aaPredicted RBP5.78□□□□□ -1.48
VPS52-219ENST00000493379 GP2P55259 537 aaKnown RBP5.78□□□□□ -1.48
VPS52-219ENST00000493379 UCP2P55851 309 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 LCN6P62502 163 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 TUBA1BP68363 451 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 TUBA4AP68366 448 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 PLP2Q04941 152 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 PIGFQ07326 219 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 SCRN3Q0VDG4 424 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 ECH1Q13011 328 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms