RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	FCN3	O75636	299 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	FSTL3	O95633	263 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	FPR3	P25089	353 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	PROK1	P58294	105 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	MPPED2	Q15777	294 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	TAF9	Q16594	264 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	MEP1B	Q16820	701 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	TTMP	Q5BVD1	217 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	BEND6	Q5SZJ8	279 aa	Predicted RBP	11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	AGBL2	Q5U5Z8	902 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	CORO6	Q6QEF8	472 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	VTCN1	Q7Z7D3	282 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	GLB1L2	Q8IW92	636 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	TMEM86B	Q8N661	226 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	OR8J3	Q8NGG0	315 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	UBE2F	Q969M7	185 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	APOBEC3D	Q96AK3	386 aa	Predicted RBP	11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	FAM71F1	Q96KD3	344 aa	Predicted RBP	11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	ZNF570	Q96NI8	536 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	TECTB	Q96PL2	329 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	RASSF4	Q9H2L5	321 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	UFSP2	Q9NUQ7	469 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	TMEM100	Q9NV29	134 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	POMT1	Q9Y6A1	747 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	DOCK11	Q5JSL3	2073 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161		A0A0U1RQK1	487 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	HTR3E	A5X5Y0	456 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	SLC22A31	A6NKX4	558 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	ZNF879	B4DU55	563 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	KHDRBS3	O75525	346 aa	Known RBP	11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	CLPX	O76031	633 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	TOX4	O94842	621 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	IFNA14	P01570	189 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	GATA4	P43694	442 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	RGS6	P49758	472 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	RAD23A	P54725	363 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	BPIFB3	P59826	476 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	LSM6	P62312	80 aa	Known RBP	11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	SELENOW	P63302	87 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	HIST1H3A	P68431	136 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	KRR1	Q13601	381 aa	Known RBP	11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	TRAM2	Q15035	370 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	ANKDD1A	Q495B1	522 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	ZBED5	Q49AG3	693 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	HIST2H3PS2	Q5TEC6	136 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	HIST2H2BD	Q6DRA6	164 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	SFRP4	Q6FHJ7	346 aa	Predicted RBP	11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	ZNF730	Q6ZMV8	503 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	PTCHD4	Q6ZW05	846 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	HIST2H3A	Q71DI3	136 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	NAA40	Q86UY6	237 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	PDZD9	Q8IXQ8	264 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	OFCC1	Q8IZS5	231 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	C1orf87	Q8N0U7	546 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	FAM156A	Q8NDB6	213 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	OR5L1	Q8NGL2	311 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	SSMEM1	Q8WWF3	244 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	STON2	Q8WXE9	905 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	WDFY2	Q96P53	400 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	TSSK2	Q96PF2	358 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	FNDC11	Q9BVV2	318 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	NUAK2	Q9H093	628 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	SMURF1	Q9HCE7	757 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	LHFPL6	Q9Y693	200 aa		11.34	□□□□□ -0.59
SAMM50-204	ENST00000493161	IGHV1-69D	A0A0B4J2H0	117 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161		J3QW42	95 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	P2RY10	O00398	339 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	DCTN6	O00399	190 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	AHCYL1	O43865	530 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	IGHV1-69	P01742	117 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	IER3	P46695	156 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	GK2	Q14410	553 aa	Predicted RBP	11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	PDCD1	Q15116	288 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	KCNMB1	Q16558	191 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	ERICH5	Q6P6B1	374 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	COLCA1	Q6ZS62	124 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	TMPRSS11F	Q6ZWK6	438 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	MBOAT2	Q6ZWT7	520 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	BOLL	Q8N9W6	283 aa	Known RBP	11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161		Q8TCH9	128 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	DYDC1	Q8WWB3	177 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	ACOT11	Q8WXI4	607 aa	Predicted RBP	11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	GATAD2B	Q8WXI9	593 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	DYRK2	Q92630	601 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	LHX4	Q969G2	390 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	SH3GL1	Q99961	368 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	SIRPD	Q9H106	197 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	NMNAT1	Q9HAN9	279 aa	Predicted RBP	11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	TCF7L1	Q9HCS4	588 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	ACOXL	Q9NUZ1	547 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	VSX1	Q9NZR4	365 aa	Predicted RBP	11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	ATPIF1	Q9UII2	106 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161	RPS6KA6	Q9UK32	745 aa		11.33	□□□□□ -0.6
SAMM50-204	ENST00000493161		A0A0G2JND7	137 aa		11.32	□□□□□ -0.6
SAMM50-204	ENST00000493161	FAM220BP	B1ANY3	271 aa		11.32	□□□□□ -0.6
SAMM50-204	ENST00000493161	C3orf80	F5H4A9	247 aa		11.32	□□□□□ -0.6
SAMM50-204	ENST00000493161	SOCS2	O14508	198 aa		11.32	□□□□□ -0.6

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