RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 MNTQ99583 582 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 ZNF251Q9BRH9 671 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 PIMREGQ9BSJ6 248 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 PDCD10Q9BUL8 212 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 DPCDQ9BVM2 203 aaPredicted RBP11.43□□□□□ -0.58
HDAC3-213ENST00000492506 SAV1Q9H4B6 383 aaPredicted RBP11.43□□□□□ -0.58
HDAC3-213ENST00000492506 REEP4Q9H6H4 257 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 DUSP22Q9NRW4 184 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 ACSS1Q9NUB1 689 aaPredicted RBP11.43□□□□□ -0.58
HDAC3-213ENST00000492506 THUMPD1Q9NXG2 353 aaKnown RBP11.43□□□□□ -0.58
HDAC3-213ENST00000492506 TAS2R16Q9NYV7 291 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 MALT1Q9UDY8 824 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 PURGQ9UJV8 347 aaKnown RBP11.43□□□□□ -0.58
HDAC3-213ENST00000492506 ATP23Q9Y6H3 246 aa11.43□□□□□ -0.58
HDAC3-213ENST00000492506 LOC390937A0A1W2PQ73 354 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 A0A1W2PQL4 384 aaPredicted RBP11.42□□□□□ -0.58
HDAC3-213ENST00000492506 PRAF2O60831 178 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 CCNB2O95067 398 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 HMGN2P05204 90 aaKnown RBP11.42□□□□□ -0.58
HDAC3-213ENST00000492506 HSMCR30P0CW71 290 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 GABRB1P18505 474 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 BTF3P20290 206 aaKnown RBP11.42□□□□□ -0.58
HDAC3-213ENST00000492506 C21orf33P30042 268 aaPredicted RBP11.42□□□□□ -0.58
HDAC3-213ENST00000492506 SLC6A1P30531 599 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 CENPAP49450 140 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 ZNF81P51508 661 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 MED22Q15528 200 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 IQCCQ4KMZ1 466 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 FAM76BQ5HYJ3 339 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 NHLRC3Q5JS37 347 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 C3orf33Q6P1S2 294 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 BHLHB9Q6PI77 547 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 C12orf54Q6X4T0 127 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 TMPPEQ6ZT21 453 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 RASSF6Q6ZTQ3 369 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 SHFQ7M4L6 423 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 CCDC36Q8IYA8 594 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 RNF113BQ8IZP6 322 aaKnown RBP11.42□□□□□ -0.58
HDAC3-213ENST00000492506 PROKR2Q8NFJ6 384 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 OR6S1Q8NH40 331 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 OR5W2Q8NH69 310 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 CLHC1Q8NHS4 586 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 APH1AQ96BI3 265 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 UPRTQ96BW1 309 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 GAL3ST1Q99999 423 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 BARHL1Q9BZE3 327 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 QRSL1Q9H0R6 528 aaKnown RBP11.42□□□□□ -0.58
HDAC3-213ENST00000492506 MIXL1Q9H2W2 232 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 DPAGT1Q9H3H5 408 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 PIF1Q9H611 641 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 PPP1R3EQ9H7J1 279 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 SNTG1Q9NSN8 517 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 ASB6Q9NWX5 421 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 MLXQ9UH92 298 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 CORO2BQ9UQ03 480 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 NPTNQ9Y639 398 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 KCNE3Q9Y6H6 103 aa11.42□□□□□ -0.58
HDAC3-213ENST00000492506 SLC22A23A1A5C7 686 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 EIF4E2O60573 245 aaKnown RBP11.41□□□□□ -0.58
HDAC3-213ENST00000492506 SC5DO75845 299 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 EGR1P18146 543 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 SDC1P18827 310 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 PPIBP23284 216 aaKnown RBP11.41□□□□□ -0.58
HDAC3-213ENST00000492506 S100PP25815 95 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 GZMMP51124 257 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 LASP1Q14847 261 aaKnown RBP11.41□□□□□ -0.58
HDAC3-213ENST00000492506 SSX1Q16384 188 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 ZSWIM7Q19AV6 140 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 FAM174BQ3ZCQ3 159 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 HES5Q5TA89 166 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 OR7E24Q6IFN5 339 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 RGS7BPQ6MZT1 257 aaPredicted RBP11.41□□□□□ -0.58
HDAC3-213ENST00000492506 CDC73Q6P1J9 531 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 MS4A15Q8N5U1 240 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 ZNF527Q8NB42 609 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 SCARB1Q8WTV0 552 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 PPCDCQ96CD2 204 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 FBXO17Q96EF6 278 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 TEX37Q96LM6 180 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 LINC00052Q96N35 136 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 TMPRSS13Q9BYE2 586 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 DPY30Q9C005 99 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 BPESC1Q9GZL8 116 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 OR51J1Q9H342 316 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 FKRPQ9H9S5 495 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 ZCCHC3Q9NUD5 404 aaKnown RBP11.41□□□□□ -0.58
HDAC3-213ENST00000492506 VNN3Q9NY84 501 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 VAPAQ9P0L0 249 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 SLAMF8Q9P0V8 285 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 NLKQ9UBE8 527 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 ZNF222Q9UK12 451 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 PTGDR2Q9Y5Y4 395 aa11.41□□□□□ -0.58
HDAC3-213ENST00000492506 LRP5LA4QPB2 252 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 GTPBP1O00178 669 aaKnown RBP11.4□□□□□ -0.58
HDAC3-213ENST00000492506 SULT2B1O00204 365 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 ZNF264O43296 627 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 VENTXO95231 258 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 ZNF3P17036 446 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 GALP22466 123 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 IL2RGP31785 369 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms