RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 MRPL55Q7Z7F7 128 aaKnown RBP1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 FAM71AQ8IYT1 594 aa1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 METTL13Q8N6R0 699 aa1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 LRRC29Q8WV35 223 aa1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 RPEQ96AT9 228 aa1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 STARD4Q96DR4 205 aa1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 NEURL3Q96EH8 262 aa1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 NRBF2Q96F24 287 aa1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 PDXPQ96GD0 296 aa1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 C9orf72Q96LT7 481 aa1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 SYNDIG1Q9H7V2 258 aa1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 ZNF430Q9H8G1 570 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 CYP3A43Q9HB55 503 aa1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 NECAP2Q9NVZ3 263 aa1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 MTFP1Q9UDX5 166 aa1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 TRMT112Q9UI30 125 aaKnown RBP1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 ZNF222Q9UK12 451 aa1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 RHBDD3Q9Y3P4 386 aa1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 GPATCH8Q9UKJ3 1502 aaKnown RBP1.66□□□□□ -2.14
HMGB1P30-201ENST00000492455 IGLV1-50A0A075B6I6 118 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 SPRR5A0A1B0GTR4 108 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF99A8MXY4 864 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 H7C1H1 209 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 NME4O00746 187 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 TRDMT1O14717 391 aaKnown RBP1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 NVLO15381 856 aaKnown RBP1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 ERI3O43414 337 aaKnown RBP1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF207O43670 478 aaKnown RBP1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 GCM2O75603 506 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 SCELO95171 688 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 HPRT1P00492 218 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 CTSLP07711 333 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 PGAM1P18669 254 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 TCN2P20062 427 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 RAB3AP20336 220 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 USF1P22415 310 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 SSTR5P35346 364 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR1G1P47890 313 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 SLC11A1P49279 550 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 FABP6P51161 128 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 P2RX1P51575 399 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 SYNJ2BPP57105 145 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 VSX2P58304 361 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF121P58317 390 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 UBE2NP61088 152 aaKnown RBP1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 ESRRGP62508 458 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 DOC2AQ14183 400 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 GABRA6Q16445 453 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 UBE2SQ16763 222 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 AVPI1Q5T686 147 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 ANGPTL8Q6UXH0 198 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 C12orf54Q6X4T0 127 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 HORMAD1Q86X24 394 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF547Q8IVP9 402 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 PRSS58Q8IYP2 241 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 CMTM8Q8IZV2 173 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 PGAM4Q8N0Y7 254 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 CBR4Q8N4T8 237 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 ARRDC1Q8N5I2 433 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 COX18Q8N8Q8 333 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 FAM184AQ8NB25 1140 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 PROKR2Q8NFJ6 384 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR6Q1Q8NGQ2 317 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR51F2Q8NH61 342 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR5W2Q8NH69 310 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 UBALD1Q8TB05 177 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 PIFOQ8TCI5 191 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 C15orf40Q8WUR7 153 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 DCPSQ96C86 337 aaKnown RBP1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 CERS2Q96G23 380 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 RNF145Q96MT1 663 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF317Q96PQ6 595 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 FOXC2Q99958 501 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 BCL7BQ9BQE9 202 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 BLZF1Q9H2G9 400 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 PIGUQ9H490 435 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 EDA2RQ9HAV5 297 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZDHHC4Q9NPG8 344 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 SLC39A1Q9NY26 324 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 CTSFQ9UBX1 484 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF282Q9UDV7 671 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 YARS2Q9Y2Z4 477 aaKnown RBP1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 YTHDF2Q9Y5A9 579 aaKnown RBP1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 SLIT3O75094 1523 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 TNS2Q63HR2 1409 aa1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 KIF26AQ9ULI4 1882 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P30-201ENST00000492455 PLEKHG2Q9H7P9 1386 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 DOCK8Q8NF50 2099 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 A0A0U1RQV1 116 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 A0A1W2PP18 115 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 TMEM120BA0PK00 339 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR6C74A6NCV1 312 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 GABRR3A8MPY1 467 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 PDZK1P1A8MUH7 402 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF705GA8MUZ8 300 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 DNASE2O00115 360 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 PLPP1O14494 284 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 MAGEB4O15481 346 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 XRCC2O43543 280 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 CTDNEP1O95476 244 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms