RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 FOXL1Q12952 345 aa12.9□□□□□ -0.34
MRPL55-231ENST00000492170 CCDC92Q53HC0 331 aaPredicted RBP12.9□□□□□ -0.34
MRPL55-231ENST00000492170 OTPQ5XKR4 325 aa12.9□□□□□ -0.34
MRPL55-231ENST00000492170 DOK3Q7L591 496 aa12.9□□□□□ -0.34
MRPL55-231ENST00000492170 OR5AS1Q8N127 324 aa12.9□□□□□ -0.34
MRPL55-231ENST00000492170 RSRC1Q96IZ7 334 aaKnown RBP12.9□□□□□ -0.34
MRPL55-231ENST00000492170 GPA33Q99795 319 aa12.9□□□□□ -0.34
MRPL55-231ENST00000492170 MAGIXQ9H6Y5 334 aa12.9□□□□□ -0.34
MRPL55-231ENST00000492170 NRIP3Q9NQ35 241 aa12.9□□□□□ -0.34
MRPL55-231ENST00000492170 PTTG3PQ9NZH4 202 aa12.9□□□□□ -0.34
MRPL55-231ENST00000492170 AURKCQ9UQB9 309 aa12.9□□□□□ -0.34
MRPL55-231ENST00000492170 SIGLEC7Q9Y286 467 aa12.9□□□□□ -0.34
MRPL55-231ENST00000492170 LRCH1Q9Y2L9 728 aa12.9□□□□□ -0.34
MRPL55-231ENST00000492170 CEACAM18A8MTB9 384 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 SOCS2O14508 198 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 RER1O15258 196 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 PTP4A3O75365 173 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 DNAJC8O75937 253 aaPredicted RBP12.89□□□□□ -0.35
MRPL55-231ENST00000492170 ATP5HO75947 161 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 DBHP09172 617 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 RPS6KA3P51812 740 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 DNM1P34Q6PK57 102 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 FBXW12Q6X9E4 464 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 ZDHHC21Q8IVQ6 265 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 OR10AD1Q8NGE0 317 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 OR13G1Q8NGZ3 307 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 APOBEC3DQ96AK3 386 aaPredicted RBP12.89□□□□□ -0.35
MRPL55-231ENST00000492170 MCUR1Q96AQ8 359 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 CCDC124Q96CT7 223 aaKnown RBP12.89□□□□□ -0.35
MRPL55-231ENST00000492170 NUAK2Q9H093 628 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 HDHD2Q9H0R4 259 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 GCM1Q9NP62 436 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 ZNF69Q9UC07 566 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 IL20RAQ9UHF4 553 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 IER3IP1Q9Y5U9 82 aa12.89□□□□□ -0.35
MRPL55-231ENST00000492170 TRBV4-1A0A0J9YWV2 114 aa12.88□□□□□ -0.35
MRPL55-231ENST00000492170 DNAJC9-AS1A6NH13 148 aa12.88□□□□□ -0.35
MRPL55-231ENST00000492170 IMPA2O14732 288 aa12.88□□□□□ -0.35
MRPL55-231ENST00000492170 HKR1P10072 659 aa12.88□□□□□ -0.35
MRPL55-231ENST00000492170 RPS2P15880 293 aaKnown RBP12.88□□□□□ -0.35
MRPL55-231ENST00000492170 CPT2P23786 658 aa12.88□□□□□ -0.35
MRPL55-231ENST00000492170 PRTN3P24158 256 aa12.88□□□□□ -0.35
MRPL55-231ENST00000492170 CRABP1P29762 137 aa12.88□□□□□ -0.35
MRPL55-231ENST00000492170 OMPP47874 163 aa12.88□□□□□ -0.35
MRPL55-231ENST00000492170 CENPAP49450 140 aa12.88□□□□□ -0.35
MRPL55-231ENST00000492170 SRP9P49458 86 aaKnown RBP12.88□□□□□ -0.35
MRPL55-231ENST00000492170 HLXQ14774 488 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-231ENST00000492170 KCNMB1Q16558 191 aa12.88□□□□□ -0.35
MRPL55-231ENST00000492170 TUSC1Q2TAM9 212 aa12.88□□□□□ -0.35
MRPL55-231ENST00000492170 KLF17Q5JT82 389 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-231ENST00000492170 OR2T2Q6IF00 324 aa12.88□□□□□ -0.35
MRPL55-231ENST00000492170 DPY19L2P2Q6ZN68 376 aa12.88□□□□□ -0.35
MRPL55-231ENST00000492170 PTCHD4Q6ZW05 846 aa12.88□□□□□ -0.35
MRPL55-231ENST00000492170 GJC3Q8NFK1 279 aa12.88□□□□□ -0.35
MRPL55-231ENST00000492170 OR8G5Q8NG78 346 aa12.88□□□□□ -0.35
MRPL55-231ENST00000492170 MEGF10Q96KG7 1140 aa12.88□□□□□ -0.35
MRPL55-231ENST00000492170 ZNF582Q96NG8 517 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-231ENST00000492170 COQ7Q99807 217 aa12.88□□□□□ -0.35
MRPL55-231ENST00000492170 SSBP3Q9BWW4 388 aaPredicted RBP12.88□□□□□ -0.35
MRPL55-231ENST00000492170 CADM1Q9BY67 442 aaKnown RBP12.88□□□□□ -0.35
MRPL55-231ENST00000492170 MGAM2Q2M2H8 2515 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 UNC119BA6NIH7 251 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 AQP12BA6NM10 295 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 GSC2O15499 205 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 GADD45GO95257 159 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 TXNDC12O95881 172 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 CDKN2AP42771 156 aaKnown RBP12.87□□□□□ -0.35
MRPL55-231ENST00000492170 RASSF2P50749 326 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 SMIM11AP58511 58 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 SPIBQ01892 262 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 BAMBIQ13145 260 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 SEC23BQ15437 767 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 SMARCD3Q6STE5 483 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 BTNL3Q6UXE8 466 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-231ENST00000492170 AQP12AQ8IXF9 295 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 ZNF420Q8TAQ5 688 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-231ENST00000492170 FANK1Q8TC84 345 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 DUX5Q96PT3 197 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 ZNF747Q9BV97 191 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 MS4A7Q9GZW8 240 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-231ENST00000492170 PCDHGB1Q9Y5G3 927 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 LHFPL6Q9Y693 200 aa12.87□□□□□ -0.35
MRPL55-231ENST00000492170 LRRC30A6NM36 301 aa12.86□□□□□ -0.35
MRPL55-231ENST00000492170 IQCF6A8MYZ5 107 aa12.86□□□□□ -0.35
MRPL55-231ENST00000492170 CYB5R3P00387 301 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-231ENST00000492170 WNT2P09544 360 aa12.86□□□□□ -0.35
MRPL55-231ENST00000492170 SELEP16581 610 aa12.86□□□□□ -0.35
MRPL55-231ENST00000492170 RRM2P31350 389 aa12.86□□□□□ -0.35
MRPL55-231ENST00000492170 HMGA2P52926 109 aa12.86□□□□□ -0.35
MRPL55-231ENST00000492170 FXYD6P3P58550 94 aa12.86□□□□□ -0.35
MRPL55-231ENST00000492170 GNB2P62879 340 aa12.86□□□□□ -0.35
MRPL55-231ENST00000492170 PAX8Q06710 450 aa12.86□□□□□ -0.35
MRPL55-231ENST00000492170 FAM98BQ52LJ0 330 aaKnown RBP12.86□□□□□ -0.35
MRPL55-231ENST00000492170 SHISA2Q6UWI4 295 aa12.86□□□□□ -0.35
MRPL55-231ENST00000492170 JAZF1Q86VZ6 243 aa12.86□□□□□ -0.35
MRPL55-231ENST00000492170 KLBQ86Z14 1044 aa12.86□□□□□ -0.35
MRPL55-231ENST00000492170 ADGRG5Q8IZF4 528 aa12.86□□□□□ -0.35
MRPL55-231ENST00000492170 C1orf87Q8N0U7 546 aa12.86□□□□□ -0.35
MRPL55-231ENST00000492170 PLEKHA8Q96JA3 519 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms