RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 IL4I1Q96RQ9 567 aa13.92□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 TEAD3Q99594 435 aa13.92□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 RHNO1Q9BSD3 238 aa13.92□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 ABHD6Q9BV23 337 aa13.92□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 C1QTNF5Q9BXJ0 243 aa13.92□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 PTTG3PQ9NZH4 202 aa13.92□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 C17orf100A8MU93 164 aa13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 TIMM8AO60220 97 aaPredicted RBP13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 FOSL1P15407 271 aa13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 OTX1P32242 354 aaPredicted RBP13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 PDLIM4P50479 330 aa13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 GRB2P62993 217 aaKnown RBP13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 PSG7Q13046 419 aa13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 AADACL4Q5VUY2 407 aa13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 NXNL2Q5VZ03 156 aa13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 ZBTB49Q6ZSB9 765 aa13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 SPATC1Q76KD6 591 aa13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 MEPCEQ7L2J0 689 aaKnown RBP13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 BCDIN3DQ7Z5W3 292 aaKnown RBP13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 GID4Q8IVV7 300 aa13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 CIARTQ8N365 385 aaPredicted RBP13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 ZNF454Q8N9F8 522 aa13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 OTOSQ8NHW6 89 aa13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 RNF133Q8WVZ7 376 aa13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 FAM168AQ92567 244 aa13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 GTF3AQ92664 365 aaKnown RBP13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 EME1Q96AY2 570 aa13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 C18orf12Q96KH6 178 aa13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 COX4I2Q96KJ9 171 aa13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 KCNJ15Q99712 375 aa13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 H2AFY2Q9P0M6 372 aaPredicted RBP13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 CGGBP1Q9UFW8 167 aaPredicted RBP13.91□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 IGHV4-30-2A0A087WSY4 118 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 PLSCR5A0PG75 271 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 LCATP04180 440 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 LYNP07948 512 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 DAOP14920 347 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 KITLGP21583 273 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 LIPAP38571 399 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 SLC15A1P46059 708 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 SLC6A9P48067 706 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 ZNF81P51508 661 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 MMP15P51511 669 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 CDC42P60953 191 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 GGTLC2Q14390 218 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 CARTPTQ16568 116 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 ZIK1Q3SY52 487 aaPredicted RBP13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 DRAM2Q6UX65 266 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 FBXW12Q6X9E4 464 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 SLC16A9Q7RTY1 509 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 NAA40Q86UY6 237 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 C10orf105Q8TEF2 133 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 HAVCR1Q96D42 359 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 CMBLQ96DG6 245 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 AMELYQ99218 206 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 SLC29A1Q99808 456 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 YIPF3Q9GZM5 350 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 TOR3AQ9H497 397 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 CYSLTR2Q9NS75 346 aa13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 PURGQ9UJV8 347 aaKnown RBP13.9□□□□□ -0.18
MSH5-SAPCD1-206ENST00000491552 ERICH4A6NGS2 130 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 SLC22A31A6NKX4 558 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 RNF223E7ERA6 249 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 SMAD7O15105 426 aaKnown RBP13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 MRPL3P09001 348 aaKnown RBP13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 INHBBP09529 407 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 RAC2P15153 192 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 HSD11B1P28845 292 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 PRKXP51817 358 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 MALLQ13021 153 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 HLXQ14774 488 aaPredicted RBP13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 RCN1Q15293 331 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 PCGF3Q3KNV8 242 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ZMAT1Q5H9K5 638 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ZNF283Q8N7M2 679 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 OR8J1Q8NGP2 316 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 FAM81AQ8TBF8 368 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 UBASH3BQ8TF42 649 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 THEM6Q8WUY1 208 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 HRASLS5Q96KN8 279 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 MBOAT4Q96T53 435 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 PIMREGQ9BSJ6 248 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 REG4Q9BYZ8 158 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 IMPAD1Q9NX62 359 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 NKIRAS2Q9NYR9 191 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 LAMP5Q9UJQ1 280 aa13.89□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 RTTNQ86VV8 2226 aa13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 VPS13CQ709C8 3753 aa13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 LOC390937A0A1W2PQ73 354 aa13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ZSCAN5BA6NJL1 495 aa13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 E9PQ18 207 aa13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 NDUFS8O00217 210 aa13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 SPRY3O43610 288 aa13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 NCR1O76036 304 aa13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 HPXP02790 462 aa13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 H2BFMP0C1H6 154 aa13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ANPEPP15144 967 aa13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 SLC25A16P16260 332 aa13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 OPRL1P41146 370 aa13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 MAGEB1P43366 347 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms