RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 CDH10Q9Y6N8 788 aa14.05□□□□□ -0.16
PDLIM2-217ENST00000491330 DHRS12A0PJE2 317 aa14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 PLPP2O43688 288 aa14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 IFNGP01579 166 aa14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 IGHV2-5P01817 119 aa14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 TAF13Q15543 124 aa14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 CCDC92Q53HC0 331 aaPredicted RBP14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 ZNF770Q6IQ21 691 aaPredicted RBP14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 CD300LDQ6UXZ3 194 aa14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 FBXW12Q6X9E4 464 aa14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 RBMS3Q6XE24 437 aaKnown RBP14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 OR6V1Q8N148 313 aa14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 GTF3AQ92664 365 aaKnown RBP14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 CCDC124Q96CT7 223 aaKnown RBP14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 GPA33Q99795 319 aa14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 ATF6BQ99941 703 aa14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 SLC22A4Q9H015 551 aa14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 TBC1D23Q9NUY8 699 aa14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 TMEM100Q9NV29 134 aa14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 PTTG3PQ9NZH4 202 aa14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 SAMHD1Q9Y3Z3 626 aaKnown RBP14.04□□□□□ -0.16
PDLIM2-217ENST00000491330 ATRQ13535 2644 aa14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 F5H5K5 113 aa14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 HAX1O00165 279 aa14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 LCATP04180 440 aa14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 BNIP1Q12981 228 aa14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 FLOT2Q14254 428 aa14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 TMEM155Q4W5P6 130 aa14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 CLEC12AQ5QGZ9 265 aa14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 SLC35F1Q5T1Q4 408 aa14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 ZBTB46Q86UZ6 589 aa14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 OR5AS1Q8N127 324 aa14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 ZFAND2BQ8WV99 257 aa14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 SPRYD4Q8WW59 207 aaPredicted RBP14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 SLC7A6OSQ96CW6 309 aaPredicted RBP14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 TSSK2Q96PF2 358 aa14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 SUCNR1Q9BXA5 334 aa14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 TEX12Q9BXU0 123 aa14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 C7orf69Q9H7B7 122 aa14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 SP140LQ9H930 580 aa14.03□□□□□ -0.16
PDLIM2-217ENST00000491330 IGLV1-36A0A0B4J1U3 117 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 TRIM77I1YAP6 450 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 GNGT2O14610 69 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 WNT9BO14905 357 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 CST1P01037 141 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 FMO3P31513 532 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 MDH2P40926 338 aaKnown RBP14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 BTG1P62324 171 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 MZT1Q08AG7 82 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 KRTAP24-1Q3LI83 254 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 ESCO2Q56NI9 601 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 OR2T2Q6IF00 324 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 MRPL21Q7Z2W9 205 aaKnown RBP14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 BPIFB2Q8N4F0 458 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 SDR9C7Q8NEX9 313 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 SLC26A10Q8NG04 563 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 OR11L1Q8NGX0 322 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 DNAJC9Q8WXX5 260 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 SLC7A6Q92536 515 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 PLEKHA8Q96JA3 519 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 OR2V2Q96R30 315 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 MRI1Q9BV20 369 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 CHID1Q9BWS9 393 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 OR5V1Q9UGF6 321 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 LHFPL6Q9Y693 200 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 CACNG2Q9Y698 323 aa14.02□□□□□ -0.17
PDLIM2-217ENST00000491330 PPIAL4EA0A075B759 164 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 PPIAL4CA0A0B4J2A2 164 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 RIIAD1A6NNX1 92 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 PPIAL4DF5H284 164 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 PPIAL4FP0DN26 164 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 GGT2P36268 569 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 SLC15A1P46059 708 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 SLC6A9P48067 706 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 HIST1H3AP68431 136 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 MEP1BQ16820 701 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 HIST2H3PS2Q5TEC6 136 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 CORO6Q6QEF8 472 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 HIST2H3AQ71DI3 136 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 PGAP1Q75T13 922 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 NLRC3Q7RTR2 1065 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 ADGRG5Q8IZF4 528 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 LNX2Q8N448 690 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 ZNF283Q8N7M2 679 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 AQP11Q8NBQ7 271 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 PAPD5Q8NDF8 572 aaKnown RBP14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 OR2T33Q8NG76 320 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 ITLN1Q8WWA0 313 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 ERGIC1Q969X5 290 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 CYB5R1Q9UHQ9 305 aa14.01□□□□□ -0.17
PDLIM2-217ENST00000491330 TCRBV3S1A0A5B6 114 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 BHLHE40O14503 412 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 DEAF1O75398 565 aaPredicted RBP14□□□□□ -0.17
PDLIM2-217ENST00000491330 GASTP01350 101 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 APOC1P02654 83 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 DBHP09172 617 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 EPHA1P21709 976 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 PAICSP22234 425 aaKnown RBP14□□□□□ -0.17
PDLIM2-217ENST00000491330 LCN2P80188 198 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms